Variant report

Variant	rs17017745
Chromosome Location	chr4:144330093-144330094
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:144316084..144318311-chr4:144327317..144330224,3	K562	blood:
2	chr4:144326817..144330491-chr4:144331809..144335886,3	K562	blood:
3	chr4:144323082..144326109-chr4:144328111..144333169,4	K562	blood:

rs_ID	r²[population]
rs17739332	1.00[YRI][hapmap]
rs2323011	1.00[CEU][hapmap]
rs2661788	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs2666350	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs28925882	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28925887	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28989230	0.83[AFR][1000 genomes]
rs62337525	0.83[AFR][1000 genomes]
rs62337526	0.83[AFR][1000 genomes]
rs62337527	0.83[AFR][1000 genomes]
rs62337528	0.95[AFR][1000 genomes]
rs62337529	0.95[AFR][1000 genomes]
rs62337530	0.95[AFR][1000 genomes]
rs62337531	0.95[AFR][1000 genomes]
rs62337532	0.95[AFR][1000 genomes]
rs745164	1.00[CEU][hapmap]

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:144312800-144331400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:144312800-144336800	Weak transcription	Fetal Muscle Trunk	muscle
3	chr4:144313800-144332000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr4:144318200-144337000	Weak transcription	Fetal Intestine Large	intestine
5	chr4:144318200-144362400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr4:144319200-144336600	Weak transcription	Fetal Kidney	kidney
7	chr4:144321800-144330200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr4:144322200-144334000	Enhancers	Fetal Heart	heart
9	chr4:144323200-144335800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr4:144323400-144330400	Enhancers	HUVEC	blood vessel
11	chr4:144324000-144332400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
12	chr4:144324600-144332800	Weak transcription	HSMM	muscle
13	chr4:144324800-144330200	Enhancers	Rectal Smooth Muscle	rectum
14	chr4:144324800-144331800	Enhancers	Brain Anterior Caudate	brain
15	chr4:144324800-144332200	Enhancers	Brain Hippocampus Middle	brain
16	chr4:144324800-144332400	Enhancers	Brain Angular Gyrus	brain
17	chr4:144324800-144333200	Weak transcription	Fetal Brain Female	brain
18	chr4:144324800-144336800	Weak transcription	Rectal Mucosa Donor 29	rectum
19	chr4:144325800-144331800	Weak transcription	HSMMtube	muscle
20	chr4:144326000-144332000	Weak transcription	Aorta	Aorta
21	chr4:144326000-144336600	Weak transcription	Placenta	Placenta
22	chr4:144326200-144337200	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr4:144326600-144336600	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr4:144326800-144333400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr4:144327200-144337200	Weak transcription	Fetal Intestine Small	intestine
26	chr4:144327400-144332800	Enhancers	Brain Substantia Nigra	brain
27	chr4:144327600-144337800	Weak transcription	Colonic Mucosa	Colon
28	chr4:144327800-144332000	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr4:144327800-144361200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr4:144327800-144388200	Weak transcription	HepG2	liver
31	chr4:144328000-144330200	Weak transcription	Right Ventricle	heart
32	chr4:144328000-144330200	Weak transcription	Spleen	Spleen
33	chr4:144328000-144332000	Weak transcription	Gastric	stomach
34	chr4:144328000-144332000	Weak transcription	Lung	lung
35	chr4:144328000-144332000	Weak transcription	Pancreas	Pancrea
36	chr4:144328000-144332000	Enhancers	Skeletal Muscle Female	skeletal muscle
37	chr4:144328000-144332200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr4:144328000-144332600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr4:144328000-144333000	Weak transcription	Stomach Mucosa	stomach
40	chr4:144328000-144333600	Enhancers	Colon Smooth Muscle	Colon
41	chr4:144328000-144336400	Weak transcription	Duodenum Mucosa	Duodenum
42	chr4:144328000-144338600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr4:144328000-144338800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr4:144328000-144346400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr4:144328000-144359200	Weak transcription	Esophagus	oesophagus
46	chr4:144328200-144330200	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr4:144328200-144330400	Enhancers	Skeletal Muscle Male	skeletal muscle
48	chr4:144328200-144332000	Weak transcription	Fetal Muscle Leg	muscle
49	chr4:144328200-144332000	Weak transcription	Ovary	ovary
50	chr4:144328200-144332200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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