The 2.0 version of rSNPBase

Variant report

Variant rs72962513
Chromosome Location chr4:106998254-106998255
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106984000-107010200 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr4:106985000-107011400 Weak transcription HepG2 liver
3 chr4:106986800-107002400 Weak transcription Stomach Smooth Muscle stomach
4 chr4:106993000-107008800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:106993200-107010000 Weak transcription Left Ventricle heart
6 chr4:106993400-107010400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr4:106993600-106998400 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr4:106993600-107002400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr4:106993600-107010000 Weak transcription Right Ventricle heart
10 chr4:106993800-107010800 Weak transcription Placenta Amnion Placenta Amnion
11 chr4:106994400-106998400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr4:106994600-106998400 Weak transcription Brain Cingulate Gyrus brain
13 chr4:106994600-107015000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:106994800-106999000 Weak transcription Brain Substantia Nigra brain
15 chr4:106994800-106999400 ZNF genes & repeats Primary hematopoietic stem cells blood
16 chr4:106994800-107011600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr4:106995000-106999000 ZNF genes & repeats Primary T cells from cord blood blood
18 chr4:106995000-107004200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:106995200-107010000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr4:106995200-107011400 Weak transcription Colonic Mucosa Colon
21 chr4:106995400-106998400 Weak transcription Duodenum Mucosa Duodenum
22 chr4:106995400-106998400 Weak transcription Fetal Brain Male brain
23 chr4:106995400-107004000 Weak transcription Fetal Stomach stomach
24 chr4:106995400-107004200 Weak transcription Thymus Thymus
25 chr4:106995400-107011000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr4:106995400-107011000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr4:106995600-107010400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr4:106995800-107000000 ZNF genes & repeats Primary B cells from cord blood blood
29 chr4:106996000-106998400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr4:106996000-107010800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:106996200-107003800 Weak transcription Pancreas Pancrea
32 chr4:106996400-106998400 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr4:106997000-106998600 Strong transcription Ovary ovary
34 chr4:106997000-106999000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
35 chr4:106997000-107000200 ZNF genes & repeats Liver Liver
36 chr4:106997200-106998400 ZNF genes & repeats Fetal Intestine Small intestine
37 chr4:106997200-106998600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
38 chr4:106997200-107000200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
39 chr4:106997200-107031000 Weak transcription Psoas Muscle Psoas
40 chr4:106997400-106999000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
41 chr4:106997400-106999000 ZNF genes & repeats Fetal Lung lung
42 chr4:106997400-107004000 Weak transcription Gastric stomach
43 chr4:106997600-106998800 ZNF genes & repeats Primary B cells from peripheral blood blood
44 chr4:106997600-106998800 ZNF genes & repeats Fetal Intestine Large intestine
45 chr4:106997600-106999400 ZNF genes & repeats Fetal Muscle Trunk muscle
46 chr4:106997800-106998600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
47 chr4:106997800-106998800 ZNF genes & repeats Brain Hippocampus Middle brain
48 chr4:106998000-106998600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
49 chr4:106998000-106998600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr4:106998000-106998600 ZNF genes & repeats Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015