The 2.0 version of rSNPBase

Variant report

Variant rs72962657
Chromosome Location chr1:92943895-92943896
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92925600-92946000 Weak transcription Right Atrium heart
2 chr1:92930800-92944400 Weak transcription Spleen Spleen
3 chr1:92939000-92944600 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr1:92939400-92944600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:92939400-92945800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr1:92939600-92944600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:92939800-92945200 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:92940000-92947400 Genic enhancers Primary T cells fromperipheralblood blood
9 chr1:92940800-92944800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:92941200-92944400 Genic enhancers Primary T cells from cord blood blood
11 chr1:92941600-92944200 Genic enhancers Fetal Thymus thymus
12 chr1:92941800-92944800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:92941800-92946000 Weak transcription Gastric stomach
14 chr1:92942000-92945600 Weak transcription Pancreas Pancrea
15 chr1:92942200-92944000 Weak transcription HepG2 liver
16 chr1:92942600-92947400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:92942600-92947600 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:92942800-92944000 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr1:92942800-92947200 Weak transcription Primary B cells from cord blood blood
20 chr1:92942800-92947600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:92943000-92944200 Genic enhancers Primary hematopoietic stem cells blood
22 chr1:92943200-92944000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:92943200-92947000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:92943200-92949200 Transcr. at gene 5' and 3' Dnd41 blood
25 chr1:92943400-92944000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
26 chr1:92943400-92945600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:92943400-92949200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
28 chr1:92943600-92944200 Weak transcription GM12878-XiMat blood
29 chr1:92943600-92944400 Genic enhancers Primary T helper naive cells from peripheral blood blood
30 chr1:92943600-92944600 Transcr. at gene 5' and 3' Thymus Thymus
31 chr1:92943600-92946000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr1:92943800-92944200 Genic enhancers Primary T helper cells fromperipheralblood blood
33 chr1:92943800-92944400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:92943800-92946600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:92943800-92946800 Strong transcription Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015