Variant report

Variant	rs729782
Chromosome Location	chr17:59486773-59486774
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:93)
CpG islands
(count:0)
Chromatin interactive
region (count:99)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:93 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr17:59486760-59486910	AoAF	blood vessel:	n/a	n/a
2	JUND	chr17:59486615-59487285	A549	lung:	n/a	n/a
3	MEF2A	chr17:59485767-59490640	SK-N-SH	brain:	n/a	chr17:59489068-59489076
4	POLR2A	chr17:59486708-59487250	ECC-1	luminal epithelium:	n/a	n/a
5	POLR2A	chr17:59486738-59487553	HepG2	liver:	n/a	n/a
6	CTCF	chr17:59486740-59486890	HBMEC	blood vessel:	n/a	n/a
7	HEY1	chr17:59486728-59487014	HepG2	liver:	n/a	chr17:59486860-59486875
8	RAD21	chr17:59486735-59487241	HepG2	liver:	n/a	n/a
9	ZBTB7A	chr17:59486773-59487191	K562	blood:	n/a	n/a
10	POLR2A	chr17:59486764-59487177	A549	lung:	n/a	n/a
11	CTCF	chr17:59486281-59487662	A549	lung:	n/a	chr17:59487051-59487069
12	RAD21	chr17:59486686-59487386	A549	lung:	n/a	n/a
13	HMGN3	chr17:59486742-59487177	K562	blood:	n/a	n/a
14	CTCF	chr17:59486760-59486910	HFF-Myc	foreskin:	n/a	n/a
15	POLR2A	chr17:59486744-59487194	MCF-7	breast:	n/a	n/a
16	FOSL2	chr17:59486660-59487179	HepG2	liver:	n/a	n/a
17	POLR2A	chr17:59486269-59486947	MCF10A-Er-Src	breast:	n/a	n/a
18	POLR2A	chr17:59486102-59488178	HepG2	liver:	n/a	n/a
19	TEAD4	chr17:59484276-59495088	A549	lung:	n/a	n/a
20	CTCF	chr17:59486700-59486850	GM12872	blood:	n/a	n/a
21	POLR2A	chr17:59486734-59487183	A549	lung:	n/a	n/a
22	RAD21	chr17:59486729-59487277	HepG2	liver:	n/a	n/a
23	BHLHE40	chr17:59486762-59486972	K562	blood:	n/a	n/a
24	HA-E2F1	chr17:59486232-59487598	MCF-7	breast:	n/a	chr17:59487288-59487298 chr17:59487290-59487297 chr17:59487287-59487298 chr17:59487289-59487297 chr17:59487289-59487297
25	CTCF	chr17:59486760-59486910	GM12871	blood:	n/a	n/a
26	MAX	chr17:59486691-59487181	ECC-1	luminal epithelium:	n/a	n/a
27	RAD21	chr17:59486684-59487221	HepG2	liver:	n/a	n/a
28	MXI1	chr17:59486669-59487384	IMR90	lung:	n/a	n/a
29	CHD2	chr17:59486634-59486952	K562	blood:	n/a	n/a
30	POLR2A	chr17:59486709-59487272	HCT-116	colon:	n/a	n/a
31	YY1	chr17:59486635-59487350	HepG2	liver:	n/a	chr17:59486860-59486871
32	MAX	chr17:59486576-59487496	HepG2	liver:	n/a	n/a
33	CTCF	chr17:59486740-59486890	GM12873	blood:	n/a	n/a
34	CTCF	chr17:59486700-59486850	MCF-7	breast:	n/a	n/a
35	CTCF	chr17:59486700-59486850	HCFaa	heart:	n/a	n/a
36	POLR2A	chr17:59486652-59487013	H1-neurons	neurons:	n/a	n/a
37	CHD2	chr17:59486649-59486842	HepG2	liver:	n/a	n/a
38	CTCF	chr17:59486738-59487226	H1-hESC	embryonic stem cell:	n/a	chr17:59487051-59487069
39	CTCF	chr17:59486698-59487196	A549	lung:	n/a	chr17:59487051-59487069
40	POLR2A	chr17:59486541-59487034	H1-neurons	neurons:	n/a	n/a
41	POLR2A	chr17:59486025-59487638	U87	brain:	n/a	n/a
42	RAD21	chr17:59483140-59491480	MCF-7	breast:	n/a	chr17:59488343-59488353 chr17:59488338-59488357 chr17:59491210-59491220 chr17:59488536-59488550 chr17:59488875-59488884 chr17:59488341-59488354 chr17:59487989-59487999 chr17:59488343-59488355
43	POLR2A	chr17:59486768-59487185	A549	lung:	n/a	n/a
44	CTCF	chr17:59486700-59486850	HPF	lung:	n/a	n/a
45	CTCF	chr17:59486740-59486890	HCPEpiC	choroid plexus:	n/a	n/a
46	POLR2A	chr17:59486113-59491295	IMR90	lung:	n/a	n/a
47	POLR2A	chr17:59486422-59486958	U87	brain:	n/a	n/a
48	CTCF	chr17:59486740-59486890	HCM	heart:	n/a	n/a
49	CREB1	chr17:59486585-59487289	A549	lung:	n/a	n/a
50	MAX	chr17:59486529-59487348	A549	lung:	n/a	n/a

No data

(count:99 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr17:59394823..59395666-chr17:59486730..59487490,2	MCF-7	breast:
2	chr17:59470525..59474011-chr17:59486288..59490375,89	MCF-7	breast:
3	chr12:7052718..7054470-chr17:59484968..59487840,2	MCF-7	breast:
4	chr15:69580447..69583184-chr17:59484403..59487018,2	MCF-7	breast:
5	chr17:59475514..59478543-chr17:59486157..59487877,18	MCF-7	breast:
6	chr16:9183889..9185864-chr17:59485613..59488168,2	MCF-7	breast:
7	chr17:59486475..59488762-chr20:45887507..45889647,2	MCF-7	breast:
8	chr17:59486593..59487144-chr20:46306725..46307231,2	MCF-7	breast:
9	chr12:52721015..52721845-chr17:59486097..59487242,3	MCF-7	breast:
10	chr17:57064353..57067451-chr17:59486567..59489337,3	MCF-7	breast:
11	chr17:59415713..59496229-chr20:49401322..49431802,760	MCF-7	breast:
12	chr17:59486632..59487251-chr17:59713098..59713648,2	MCF-7	breast:
13	chr17:59467001..59468511-chr17:59486417..59487797,11	MCF-7	breast:
14	chr16:85588910..85591052-chr17:59486534..59488510,2	MCF-7	breast:
15	chr17:59473726..59474625-chr17:59486735..59487548,2	MCF-7	breast:
16	chr12:14922167..14924156-chr17:59485855..59488624,2	MCF-7	breast:
17	chr12:57400260..57400857-chr17:59486758..59487383,2	MCF-7	breast:
18	chr17:58797880..58798766-chr17:59486610..59487492,2	K562	blood:
19	chr17:59486721..59489555-chr19:54973484..54975427,2	MCF-7	breast:
20	chr17:59485117..59489801-chr22:29195073..29197990,4	MCF-7	breast:
21	chr17:58797860..58798402-chr17:59486616..59487458,3	MCF-7	breast:
22	chr17:59485603..59490421-chr20:49409438..49412592,198	MCF-7	breast:
23	chr17:59079245..59080252-chr17:59486366..59487673,15	MCF-7	breast:
24	chr17:57076071..57077783-chr17:59486729..59488516,2	MCF-7	breast:
25	chr17:59048920..59050180-chr17:59486453..59487524,7	MCF-7	breast:
26	chr17:59485530..59487637-chr20:52824425..52826103,2	MCF-7	breast:
27	chr17:59486532..59487507-chr17:59651731..59653022,4	MCF-7	breast:
28	chr1:112533638..112534684-chr17:59486649..59487467,4	MCF-7	breast:
29	chr13:44715189..44715758-chr17:59486594..59487123,2	MCF-7	breast:
30	chr1:219876789..219878405-chr17:59486605..59488633,2	MCF-7	breast:
31	chr17:59486124..59488100-chr22:29213304..29216016,2	MCF-7	breast:
32	chr17:59475462..59478386-chr17:59485811..59488031,27	MCF-7	breast:
33	chr17:57101152..57103886-chr17:59486646..59488285,2	MCF-7	breast:
34	chr16:29937059..29937776-chr17:59486654..59487290,2	MCF-7	breast:
35	chr17:59486591..59487351-chr19:36001014..36001533,2	MCF-7	breast:
36	chr17:59486098..59489964-chr20:45947329..45951517,6	MCF-7	breast:
37	chr17:59486248..59487525-chr20:49406725..49407926,24	MCF-7	breast:
38	chr17:59486342..59487355-chr17:59660019..59660906,3	MCF-7	breast:
39	chr17:56734979..56738872-chr17:59484133..59487824,5	MCF-7	breast:
40	chr17:59079471..59082667-chr17:59485930..59489124,3	MCF-7	breast:
41	chr17:59485283..59487491-chr8:96036990..96038836,2	MCF-7	breast:
42	chr17:59047682..59048416-chr17:59486662..59487230,2	MCF-7	breast:
43	chr17:59485646..59489353-chr20:52553682..52557868,4	MCF-7	breast:
44	chr17:57917727..57920110-chr17:59485356..59487364,3	MCF-7	breast:
45	chr17:59485770..59488369-chr20:45984585..45986110,2	MCF-7	breast:
46	chr1:121483602..121485397-chr17:59486737..59488712,2	MCF-7	breast:
47	chr17:59119635..59120302-chr17:59486643..59487282,2	MCF-7	breast:
48	chr17:59486424..59487872-chr20:49406517..49407899,15	MCF-7	breast:
49	chr17:58156445..58158243-chr17:59484791..59486800,2	MCF-7	breast:
50	chr17:59485092..59487967-chr20:49409770..49412327,54	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TBX2-2	chr17:59486619-59486827	NONHSAT055134

No data

Variant related genes	Relation type
C17orf82	TF binding region
ENSG00000226308	Chromatin interaction
ENSG00000259701	Chromatin interaction
ENSG00000141376	Chromatin interaction
ENSG00000101144	Chromatin interaction
ENSG00000183955	Chromatin interaction
ENSG00000136492	Chromatin interaction
ENSG00000226471	Chromatin interaction
ENSG00000100219	Chromatin interaction
ENSG00000124243	Chromatin interaction
ENSG00000101132	Chromatin interaction
ENSG00000161249	Chromatin interaction
ENSG00000089356	Chromatin interaction
ENSG00000267416	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000108423	Chromatin interaction
ENSG00000267131	Chromatin interaction
ENSG00000108443	Chromatin interaction
ENSG00000111678	Chromatin interaction
ENSG00000267280	Chromatin interaction
ENSG00000212195	Chromatin interaction
ENSG00000089157	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000261634	Chromatin interaction
ENSG00000156170	Chromatin interaction
ENSG00000171385	Chromatin interaction
ENSG00000121068	Chromatin interaction
ENSG00000124181	Chromatin interaction
ENSG00000236352	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000174943	Chromatin interaction
ENSG00000197837	Chromatin interaction
ENSG00000182831	Chromatin interaction
ENSG00000124171	Chromatin interaction
ENSG00000231437	Chromatin interaction
ENSG00000182909	Chromatin interaction
ENSG00000062716	Chromatin interaction
ENSG00000238923	Chromatin interaction
ENSG00000101040	Chromatin interaction
ENSG00000249859	Chromatin interaction
ENSG00000267637	Chromatin interaction
ENSG00000226648	Chromatin interaction
ENSG00000216168	Chromatin interaction
ENSG00000272173	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1076393	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1132179	0.83[EUR][1000 genomes]
rs12451524	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2286524	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3744449	0.95[EUR][1000 genomes]
rs3760369	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4455026	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59051236	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7208889	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7214900	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs740753	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs740754	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8066348	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8075606	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8078820	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8080990	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1065939	chr17:59283350-59517730	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	331 gene(s)	inside rSNPs	diseases
2	nsv833505	chr17:59323466-59518007	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	326 gene(s)	inside rSNPs	diseases
3	nsv833506	chr17:59362377-59562984	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
4	nsv518130	chr17:59456589-59491281	Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	265 gene(s)	inside rSNPs	diseases
5	esv1796927	chr17:59460119-59495319	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	270 gene(s)	inside rSNPs	diseases
6	nsv908663	chr17:59464069-59521310	Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	278 gene(s)	inside rSNPs	diseases
7	nsv908664	chr17:59465697-59491030	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	261 gene(s)	inside rSNPs	diseases
8	nsv908665	chr17:59470193-59494574	Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	264 gene(s)	inside rSNPs	diseases
9	nsv908666	chr17:59470842-59489822	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	253 gene(s)	inside rSNPs	diseases
10	nsv908667	chr17:59471151-59491030	Flanking Active TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	256 gene(s)	inside rSNPs	diseases
11	nsv908668	chr17:59471151-59494574	Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	263 gene(s)	inside rSNPs	diseases
12	nsv908669	chr17:59471372-59491030	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	255 gene(s)	inside rSNPs	diseases
13	nsv908670	chr17:59471372-59494574	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	262 gene(s)	inside rSNPs	diseases
14	nsv908671	chr17:59475888-59494574	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	255 gene(s)	inside rSNPs	diseases
15	nsv908672	chr17:59476062-59494574	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	255 gene(s)	inside rSNPs	diseases
16	nsv828081	chr17:59486746-59487226	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
17	nsv828082	chr17:59486751-59487226	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
18	nsv828083	chr17:59486757-59487226	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:59478000-59488200	Transcr. at gene 5' and 3'	NHLF	lung
2	chr17:59478200-59487600	Transcr. at gene 5' and 3'	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr17:59478200-59487800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr17:59479400-59487200	Weak transcription	Hela-S3	cervix
5	chr17:59480400-59488000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
6	chr17:59484400-59487000	Bivalent Enhancer	Spleen	Spleen
7	chr17:59484600-59487200	Enhancers	Liver	Liver
8	chr17:59485000-59487800	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
9	chr17:59485200-59488000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
10	chr17:59485400-59488600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
11	chr17:59485800-59487200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
12	chr17:59485800-59489000	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
13	chr17:59486000-59486800	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
14	chr17:59486000-59486800	Transcr. at gene 5' and 3'	Fetal Lung	lung
15	chr17:59486000-59487800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
16	chr17:59486000-59488000	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
17	chr17:59486200-59486800	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr17:59486200-59486800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr17:59486200-59487200	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
20	chr17:59486200-59487400	Active TSS	Right Ventricle	heart
21	chr17:59486200-59489800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr17:59486400-59486800	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
23	chr17:59486400-59486800	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
24	chr17:59486400-59486800	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
25	chr17:59486400-59486800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
26	chr17:59486400-59486800	Flanking Active TSS	Brain Hippocampus Middle	brain
27	chr17:59486400-59487000	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
28	chr17:59486400-59487000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr17:59486400-59487000	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
30	chr17:59486400-59487000	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
31	chr17:59486400-59487000	Bivalent/Poised TSS	HUVEC	blood vessel
32	chr17:59486400-59487000	Active TSS	K562	blood
33	chr17:59486400-59487000	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
34	chr17:59486400-59487000	Active TSS	NH-A	brain
35	chr17:59486400-59487000	Active TSS	NHDF-Ad	bronchial
36	chr17:59486400-59487200	Bivalent/Poised TSS	Primary T cells from cord blood	blood
37	chr17:59486400-59487200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr17:59486400-59487200	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr17:59486400-59487200	Bivalent/Poised TSS	Primary mononuclear cells fromperipheralblood	Blood
40	chr17:59486400-59487200	Bivalent Enhancer	Fetal Brain Male	brain
41	chr17:59486400-59487200	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
42	chr17:59486400-59487200	Active TSS	HepG2	liver
43	chr17:59486400-59487400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr17:59486400-59487400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr17:59486400-59487400	Active TSS	Right Atrium	heart
46	chr17:59486400-59490600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
47	chr17:59486400-59490800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr17:59486600-59486800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
49	chr17:59486600-59486800	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr17:59486600-59486800	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links