Variant report

Variant rs8078820
Chromosome Location chr17:59478591-59478592
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59473400-59479800 Bivalent Enhancer Primary T cells fromperipheralblood blood
2 chr17:59474200-59479000 Active TSS Aorta Aorta
3 chr17:59474200-59481000 Active TSS NHDF-Ad bronchial
4 chr17:59474400-59479800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr17:59475000-59479200 Active TSS HSMM muscle
6 chr17:59475000-59480400 Bivalent/Poised TSS Fetal Intestine Small intestine
7 chr17:59475400-59478800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr17:59475400-59479600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
9 chr17:59475800-59479400 Active TSS Osteobl bone
10 chr17:59476200-59478600 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr17:59476200-59478600 Active TSS Muscle Satellite Cultured Cells --
12 chr17:59476200-59478600 Active TSS Fetal Kidney kidney
13 chr17:59476200-59478800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr17:59476200-59479000 Active TSS HSMMtube muscle
15 chr17:59476200-59479600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr17:59476400-59478600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr17:59476400-59478600 Bivalent/Poised TSS Thymus Thymus
18 chr17:59476400-59479000 Active TSS Ovary ovary
19 chr17:59476400-59479400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr17:59476600-59480600 Active TSS Right Atrium heart
21 chr17:59476800-59478600 Active TSS NH-A brain
22 chr17:59476800-59479000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
23 chr17:59476800-59479000 Bivalent/Poised TSS Colonic Mucosa Colon
24 chr17:59476800-59479000 Active TSS Lung lung
25 chr17:59476800-59479200 Active TSS Right Ventricle heart
26 chr17:59476800-59479600 Active TSS Pancreas Pancrea
27 chr17:59477000-59479000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
28 chr17:59477200-59480400 Bivalent Enhancer Primary B cells from peripheral blood blood
29 chr17:59477200-59482200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
30 chr17:59477400-59478600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:59477400-59478600 Active TSS HepG2 liver
32 chr17:59477400-59478800 Bivalent/Poised TSS NHEK skin
33 chr17:59477400-59479800 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
34 chr17:59477800-59478600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr17:59477800-59480400 Active TSS Gastric stomach
36 chr17:59477800-59482000 Bivalent/Poised TSS Duodenum Mucosa Duodenum
37 chr17:59478000-59478600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr17:59478000-59478600 Flanking Active TSS Adipose Nuclei Adipose
39 chr17:59478000-59478600 Flanking Active TSS A549 lung
40 chr17:59478000-59478800 Bivalent Enhancer Primary B cells from cord blood blood
41 chr17:59478000-59478800 Bivalent/Poised TSS Brain Angular Gyrus brain
42 chr17:59478000-59478800 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
43 chr17:59478000-59479000 Bivalent Enhancer Primary hematopoietic stem cells blood
44 chr17:59478000-59479000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
45 chr17:59478000-59479000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
46 chr17:59478000-59479200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr17:59478000-59479200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
48 chr17:59478000-59479200 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr17:59478000-59479400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
50 chr17:59478000-59479600 Bivalent Enhancer H1 Cell Line embryonic stem cell

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