Variant report

Variant	rs72986181
Chromosome Location	chr11:105385295-105385296
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:105383411..105385791-chr11:105407400..105409050,2	K562	blood:
2	chr11:105385111..105387374-chr11:105388976..105390591,2	K562	blood:
3	chr11:105384754..105389238-chr11:105390610..105395129,6	K562	blood:
4	chr11:105380418..105382873-chr11:105384814..105386801,3	K562	blood:
5	chr11:105380496..105383732-chr11:105384771..105387994,4	K562	blood:

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10502054	0.85[EUR][1000 genomes]
rs17093789	0.85[EUR][1000 genomes]
rs17104173	0.82[EUR][1000 genomes]
rs17104209	0.85[EUR][1000 genomes]
rs17104214	0.85[EUR][1000 genomes]
rs17104217	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17104241	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1945959	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28379652	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34470220	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35367676	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59655467	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6591127	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6650183	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72979813	0.81[EUR][1000 genomes]
rs72979825	0.85[EUR][1000 genomes]
rs72979826	0.85[EUR][1000 genomes]
rs72979881	0.85[EUR][1000 genomes]
rs72979886	0.85[EUR][1000 genomes]
rs72979894	0.85[EUR][1000 genomes]
rs72979895	0.85[EUR][1000 genomes]
rs72979896	0.85[EUR][1000 genomes]
rs72979899	0.85[EUR][1000 genomes]
rs72979902	0.85[EUR][1000 genomes]
rs72981808	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72981833	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984105	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984108	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984116	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984140	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984142	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984149	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984153	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984171	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984175	0.88[ASN][1000 genomes]
rs72984177	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984181	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72984192	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986112	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986117	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986123	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986125	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986138	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986140	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72986176	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986177	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72986179	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72988133	0.94[ASN][1000 genomes]
rs72991703	0.81[ASN][1000 genomes]
rs7933555	0.85[EUR][1000 genomes]
rs7943574	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7949848	0.85[EUR][1000 genomes]
rs9666259	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9667422	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9919672	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949337	chr11:104950007-105510193	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv556221	chr11:105243371-105392079	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105385200-105387800	Active TSS	K562	blood

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