The 2.0 version of rSNPBase

Variant report

Variant rs72997316
Chromosome Location chr3:143549010-143549011
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:143539600-143550000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:143539800-143558200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr3:143540000-143549600 Weak transcription HSMM muscle
4 chr3:143541000-143554200 Weak transcription Fetal Muscle Trunk muscle
5 chr3:143541400-143565200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr3:143541800-143549800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr3:143542000-143553600 Weak transcription Brain Cingulate Gyrus brain
8 chr3:143542200-143549800 Weak transcription Brain Anterior Caudate brain
9 chr3:143542200-143552400 Weak transcription Brain Angular Gyrus brain
10 chr3:143542200-143553600 Weak transcription Brain Hippocampus Middle brain
11 chr3:143543600-143551400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr3:143544000-143549800 Weak transcription Adipose Nuclei Adipose
13 chr3:143544200-143549200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr3:143544200-143552800 Weak transcription Fetal Lung lung
15 chr3:143544400-143549600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr3:143545000-143549800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:143545400-143549800 Weak transcription Brain Substantia Nigra brain
18 chr3:143545400-143550000 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr3:143545400-143550000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr3:143545400-143550200 Weak transcription Duodenum Mucosa Duodenum
21 chr3:143545400-143550400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr3:143545400-143550400 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr3:143545400-143558800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:143545600-143565400 Weak transcription Primary T cells fromperipheralblood blood
25 chr3:143545800-143549400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr3:143545800-143549800 Weak transcription Primary B cells from peripheral blood blood
27 chr3:143545800-143550000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr3:143545800-143551000 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr3:143546000-143550200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr3:143546000-143559000 Weak transcription Primary B cells from cord blood blood
31 chr3:143546200-143549800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr3:143546800-143549200 Weak transcription Muscle Satellite Cultured Cells --
33 chr3:143546800-143550200 Weak transcription Rectal Smooth Muscle rectum
34 chr3:143547000-143558200 Weak transcription Esophagus oesophagus
35 chr3:143547200-143549200 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr3:143548000-143549400 Strong transcription Primary T cells from cord blood blood
37 chr3:143548400-143549400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr3:143548600-143549200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr3:143548600-143549800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:143548800-143549200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr3:143548800-143550000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr3:143548800-143551600 Enhancers Stomach Mucosa stomach
43 chr3:143548800-143551600 Enhancers NHLF lung
44 chr3:143548800-143551800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr3:143548800-143551800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr3:143549000-143549800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:143549000-143549800 Enhancers GM12878-XiMat blood
48 chr3:143549000-143550000 Enhancers NHDF-Ad bronchial
49 chr3:143549000-143550400 Enhancers Primary hematopoietic stem cells blood
50 chr3:143549000-143551000 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015