The 2.0 version of rSNPBase

Variant report

Variant rs72997628
Chromosome Location chr3:105530148-105530149
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:105511400-105566400 Weak transcription Aorta Aorta
4 chr3:105512200-105534200 Weak transcription Left Ventricle heart
5 chr3:105515400-105539000 Weak transcription Fetal Muscle Trunk muscle
6 chr3:105519200-105541600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr3:105520800-105531400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr3:105521200-105530200 Weak transcription HMEC breast
9 chr3:105521200-105531200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr3:105521200-105536000 Weak transcription Right Ventricle heart
11 chr3:105521200-105546800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:105521400-105530200 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr3:105521400-105541200 Weak transcription Fetal Muscle Leg muscle
14 chr3:105521400-105542000 Weak transcription Fetal Stomach stomach
15 chr3:105521600-105530200 Weak transcription Primary B cells from peripheral blood blood
16 chr3:105522400-105533800 Weak transcription Brain Germinal Matrix brain
17 chr3:105522400-105541200 Weak transcription Primary T cells from cord blood blood
18 chr3:105524000-105530800 Weak transcription NH-A brain
19 chr3:105524200-105532200 Enhancers Primary T helper cells PMA-I stimulated --
20 chr3:105524600-105530200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr3:105524600-105541600 Weak transcription Right Atrium heart
22 chr3:105525600-105540200 Weak transcription NHLF lung
23 chr3:105525800-105530200 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr3:105525800-105531200 Weak transcription HSMM muscle
25 chr3:105526000-105530400 Weak transcription GM12878-XiMat blood
26 chr3:105526000-105530400 Weak transcription NHEK skin
27 chr3:105526000-105531000 Weak transcription HUVEC blood vessel
28 chr3:105526200-105530200 Weak transcription NHDF-Ad bronchial
29 chr3:105526200-105534000 Weak transcription Primary T cells fromperipheralblood blood
30 chr3:105526200-105541600 Weak transcription Primary hematopoietic stem cells blood
31 chr3:105526200-105542400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:105526400-105530800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:105526400-105531000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:105526800-105530200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:105527600-105537800 Weak transcription Primary B cells from cord blood blood
36 chr3:105527800-105530400 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:105527800-105530600 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr3:105527800-105533600 Enhancers Osteobl bone
39 chr3:105528200-105530600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr3:105528400-105530200 Weak transcription Hela-S3 cervix
41 chr3:105528400-105531200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr3:105528400-105541600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr3:105528400-105542000 Weak transcription Pancreas Pancrea
44 chr3:105528400-105543200 Weak transcription Gastric stomach
45 chr3:105528400-105553600 Weak transcription Fetal Kidney kidney
46 chr3:105528600-105530200 Weak transcription Small Intestine intestine
47 chr3:105528600-105530400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr3:105528600-105531200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr3:105528600-105542600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr3:105528800-105530200 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015