Variant report

Variant	rs73029830
Chromosome Location	chr1:159322264-159322265
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs13374923	0.95[AFR][1000 genomes]
rs13375571	1.00[AMR][1000 genomes]
rs13375614	1.00[AMR][1000 genomes]
rs13376196	1.00[AMR][1000 genomes]
rs4636457	1.00[AMR][1000 genomes]
rs57115562	1.00[AMR][1000 genomes]
rs59594015	1.00[AMR][1000 genomes]
rs73013306	1.00[AMR][1000 genomes]
rs73013308	1.00[AMR][1000 genomes]
rs73013312	1.00[AMR][1000 genomes]
rs73013313	1.00[AMR][1000 genomes]
rs73013315	1.00[AMR][1000 genomes]
rs73013316	1.00[AMR][1000 genomes]
rs73013319	1.00[AMR][1000 genomes]
rs73013323	1.00[AMR][1000 genomes]
rs73013326	1.00[AMR][1000 genomes]
rs73013329	1.00[AMR][1000 genomes]
rs73013335	1.00[AMR][1000 genomes]
rs73013340	1.00[AMR][1000 genomes]
rs73013346	1.00[AMR][1000 genomes]
rs73013352	1.00[AMR][1000 genomes]
rs73013355	1.00[AMR][1000 genomes]
rs73013357	1.00[AMR][1000 genomes]
rs73013360	1.00[AMR][1000 genomes]
rs73013361	1.00[AMR][1000 genomes]
rs73017432	1.00[AMR][1000 genomes]
rs73017434	1.00[AMR][1000 genomes]
rs73017437	1.00[AMR][1000 genomes]
rs73017439	1.00[AMR][1000 genomes]
rs73017469	1.00[AMR][1000 genomes]
rs73017477	1.00[AMR][1000 genomes]
rs73027947	1.00[AMR][1000 genomes]
rs73027965	1.00[AMR][1000 genomes]
rs73031609	1.00[AMR][1000 genomes]
rs73031611	1.00[AMR][1000 genomes]
rs73031623	1.00[AMR][1000 genomes]
rs73031628	1.00[AMR][1000 genomes]
rs73031644	1.00[AMR][1000 genomes]
rs73031647	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv872488	chr1:159218266-159336948	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv3451967	chr1:159299928-159322549	Enhancers Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159321600-159322800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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