Variant report

Variant	rs73034079
Chromosome Location	chr1:172585364-172585365
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr1:172585264-172585718	HL-60	blood:	n/a	n/a
2	SPI1	chr1:172585284-172586138	HL-60	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172567348..172569874-chr1:172585238..172587160,2	K562	blood:

Variant related genes	Relation type
RNU6-693P	TF binding region

rs_ID	r²[population]
rs57241865	1.00[EUR][1000 genomes]
rs73032185	1.00[EUR][1000 genomes]
rs73032191	1.00[EUR][1000 genomes]
rs73034014	1.00[EUR][1000 genomes]
rs73034022	1.00[EUR][1000 genomes]
rs73034036	1.00[EUR][1000 genomes]
rs73034055	1.00[EUR][1000 genomes]
rs73034058	1.00[EUR][1000 genomes]
rs73034068	1.00[EUR][1000 genomes]
rs73034085	1.00[EUR][1000 genomes]
rs73034089	1.00[EUR][1000 genomes]
rs73034091	1.00[EUR][1000 genomes]
rs73034095	1.00[EUR][1000 genomes]
rs73034097	1.00[EUR][1000 genomes]
rs73034101	1.00[EUR][1000 genomes]
rs73036104	1.00[EUR][1000 genomes]
rs73036109	1.00[EUR][1000 genomes]
rs73036110	1.00[EUR][1000 genomes]
rs73036126	1.00[EUR][1000 genomes]
rs74124208	1.00[EUR][1000 genomes]

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172566600-172595800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr1:172570600-172585400	Weak transcription	Aorta	Aorta
3	chr1:172576800-172585400	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr1:172579400-172585400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:172579800-172588600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr1:172580000-172585400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:172580200-172589800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr1:172580600-172585400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr1:172580800-172585400	Weak transcription	Placenta	Placenta
10	chr1:172580800-172588800	Weak transcription	NH-A	brain
11	chr1:172581000-172585600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr1:172581000-172585800	Weak transcription	Placenta Amnion	Placenta Amnion
13	chr1:172581000-172586400	Weak transcription	Primary T cells from cord blood	blood
14	chr1:172581000-172589400	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr1:172582000-172588600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr1:172582600-172585400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr1:172584600-172586800	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr1:172585200-172585600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr1:172585200-172585600	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr1:172585200-172585800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
21	chr1:172585200-172586400	Enhancers	Primary neutrophils fromperipheralblood	blood

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