The 2.0 version of rSNPBase

Variant report

Variant rs73034055
Chromosome Location chr1:172569030-172569031
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172519400-172571600 Weak transcription Brain Angular Gyrus brain
2 chr1:172535600-172569200 Weak transcription Gastric stomach
3 chr1:172540200-172581000 Weak transcription Colonic Mucosa Colon
4 chr1:172557400-172581200 Weak transcription Fetal Heart heart
5 chr1:172557600-172574600 Weak transcription Stomach Mucosa stomach
6 chr1:172559000-172583400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:172559400-172571600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:172559800-172573400 Weak transcription Fetal Brain Male brain
9 chr1:172560000-172569600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:172560000-172578400 Weak transcription HSMMtube muscle
11 chr1:172560000-172580600 Weak transcription Small Intestine intestine
12 chr1:172560000-172581200 Weak transcription Psoas Muscle Psoas
13 chr1:172560000-172582400 Weak transcription Brain Substantia Nigra brain
14 chr1:172560200-172569200 Weak transcription Osteobl bone
15 chr1:172560200-172569400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:172560200-172574200 Weak transcription HUVEC blood vessel
17 chr1:172560200-172581800 Weak transcription Hela-S3 cervix
18 chr1:172560400-172569200 Weak transcription GM12878-XiMat blood
19 chr1:172560400-172569600 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:172560400-172569600 Weak transcription HMEC breast
21 chr1:172560400-172571400 Weak transcription Brain Cingulate Gyrus brain
22 chr1:172560400-172572800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:172560600-172569200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:172563600-172574400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:172563600-172574800 Strong transcription Primary B cells from peripheral blood blood
26 chr1:172563800-172581200 Strong transcription Primary B cells from cord blood blood
27 chr1:172563800-172582000 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr1:172564400-172581000 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr1:172564400-172582000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:172564600-172579200 Weak transcription Fetal Kidney kidney
31 chr1:172564800-172571600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:172565200-172573400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:172565400-172572000 Strong transcription Fetal Lung lung
34 chr1:172565400-172573000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:172565400-172574000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:172566000-172573600 Weak transcription Brain Anterior Caudate brain
37 chr1:172566000-172574800 Strong transcription Primary T helper cells PMA-I stimulated --
38 chr1:172566000-172581200 Strong transcription Primary monocytes fromperipheralblood blood
39 chr1:172566200-172575000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:172566400-172569800 Strong transcription Placenta Placenta
41 chr1:172566400-172573200 Weak transcription Brain Hippocampus Middle brain
42 chr1:172566400-172573600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:172566400-172573800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:172566400-172575000 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr1:172566400-172575000 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr1:172566400-172576800 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:172566600-172569200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:172566600-172569200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:172566600-172569200 Weak transcription Left Ventricle heart
50 chr1:172566600-172569200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015