The 2.0 version of rSNPBase

Variant report

Variant rs73034024
Chromosome Location chr1:172537553-172537554
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172511800-172557800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:172514200-172558800 Weak transcription Small Intestine intestine
3 chr1:172516800-172550200 Weak transcription Fetal Heart heart
4 chr1:172519200-172559000 Weak transcription Psoas Muscle Psoas
5 chr1:172519400-172571600 Weak transcription Brain Angular Gyrus brain
6 chr1:172519600-172538000 Weak transcription Hela-S3 cervix
7 chr1:172519800-172539200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:172521800-172539800 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr1:172521800-172540400 Strong transcription Primary B cells from cord blood blood
10 chr1:172521800-172560400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:172524000-172538200 Strong transcription Dnd41 blood
12 chr1:172524000-172538400 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr1:172524000-172540400 Strong transcription Primary T cells fromperipheralblood blood
14 chr1:172524200-172539600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:172524200-172539600 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr1:172524400-172539000 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr1:172524400-172540000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:172524600-172539800 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr1:172524800-172540400 Strong transcription iPS-18 Cell Line embryonic stem cell
20 chr1:172525000-172540400 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr1:172526200-172540400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:172527000-172539600 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr1:172527000-172558000 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr1:172527200-172540000 Weak transcription Colonic Mucosa Colon
25 chr1:172527800-172550400 Weak transcription Stomach Mucosa stomach
26 chr1:172527800-172554600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:172528400-172539400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr1:172528400-172543000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr1:172528400-172547800 Weak transcription A549 lung
30 chr1:172528600-172539200 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:172529000-172538400 Weak transcription NHDF-Ad bronchial
32 chr1:172529200-172539800 Weak transcription NHLF lung
33 chr1:172529800-172540000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:172531000-172538600 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:172531200-172538400 Weak transcription Osteobl bone
36 chr1:172531800-172540400 Strong transcription Duodenum Mucosa Duodenum
37 chr1:172532000-172539600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:172532200-172538600 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:172532800-172540400 Strong transcription Placenta Placenta
40 chr1:172533000-172539200 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:172533000-172540400 Strong transcription Adipose Nuclei Adipose
42 chr1:172533200-172538600 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr1:172533200-172540000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:172533200-172540200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:172533400-172538400 Weak transcription GM12878-XiMat blood
46 chr1:172533400-172540200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:172533400-172540400 Strong transcription Primary B cells from peripheral blood blood
48 chr1:172533600-172540000 Strong transcription Primary monocytes fromperipheralblood blood
49 chr1:172533600-172540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:172533600-172540200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015