The 2.0 version of rSNPBase

Variant report

Variant rs73034027
Chromosome Location chr1:172538749-172538750
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172511800-172557800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:172514200-172558800 Weak transcription Small Intestine intestine
3 chr1:172516800-172550200 Weak transcription Fetal Heart heart
4 chr1:172519200-172559000 Weak transcription Psoas Muscle Psoas
5 chr1:172519400-172571600 Weak transcription Brain Angular Gyrus brain
6 chr1:172519800-172539200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:172521800-172539800 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:172521800-172540400 Strong transcription Primary B cells from cord blood blood
9 chr1:172521800-172560400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr1:172524000-172540400 Strong transcription Primary T cells fromperipheralblood blood
11 chr1:172524200-172539600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:172524200-172539600 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr1:172524400-172539000 Strong transcription iPS-20b Cell Line embryonic stem cell
14 chr1:172524400-172540000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:172524600-172539800 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr1:172524800-172540400 Strong transcription iPS-18 Cell Line embryonic stem cell
17 chr1:172525000-172540400 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr1:172526200-172540400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:172527000-172539600 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr1:172527000-172558000 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:172527200-172540000 Weak transcription Colonic Mucosa Colon
22 chr1:172527800-172550400 Weak transcription Stomach Mucosa stomach
23 chr1:172527800-172554600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:172528400-172539400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:172528400-172543000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:172528400-172547800 Weak transcription A549 lung
27 chr1:172528600-172539200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:172529200-172539800 Weak transcription NHLF lung
29 chr1:172529800-172540000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:172531800-172540400 Strong transcription Duodenum Mucosa Duodenum
31 chr1:172532000-172539600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:172532800-172540400 Strong transcription Placenta Placenta
33 chr1:172533000-172539200 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:172533000-172540400 Strong transcription Adipose Nuclei Adipose
35 chr1:172533200-172540000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:172533200-172540200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:172533400-172540200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:172533400-172540400 Strong transcription Primary B cells from peripheral blood blood
39 chr1:172533600-172540000 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:172533600-172540000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:172533600-172540200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:172533800-172539400 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr1:172534200-172540000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:172534400-172540400 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:172534600-172539800 Weak transcription Brain Cingulate Gyrus brain
46 chr1:172534800-172558000 Weak transcription Stomach Smooth Muscle stomach
47 chr1:172535200-172547800 Weak transcription Colon Smooth Muscle Colon
48 chr1:172535200-172558000 Weak transcription HSMMtube muscle
49 chr1:172535400-172539600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:172535400-172539800 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015