Variant report

Variant	rs73036961
Chromosome Location	chr12:8983462-8983463
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-M6PR-3	chr12:8983258-8983543	ENSG00000256661.1

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10743503	1.00[EUR][1000 genomes]
rs12303291	1.00[EUR][1000 genomes]
rs12303661	1.00[EUR][1000 genomes]
rs1344452	1.00[EUR][1000 genomes]
rs2098244	1.00[EUR][1000 genomes]
rs2377599	1.00[EUR][1000 genomes]
rs28371455	1.00[EUR][1000 genomes]
rs4883188	1.00[EUR][1000 genomes]
rs56046421	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs59758568	0.97[AFR][1000 genomes]
rs73036962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036963	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036965	1.00[EUR][1000 genomes]
rs73036969	1.00[EUR][1000 genomes]
rs73036972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036979	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036986	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036989	1.00[EUR][1000 genomes]
rs73036991	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036994	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036998	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73036999	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73037000	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73037001	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73037002	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73038726	1.00[AMR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8976800-8984000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr12:8976800-8985000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr12:8979000-8995400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr12:8979200-8983800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:8979200-8985400	Enhancers	Placenta	Placenta
6	chr12:8980600-8984200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr12:8980600-8985800	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr12:8980800-8984600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr12:8981000-8984600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr12:8981600-8983600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr12:8981600-8987200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr12:8981800-8986800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr12:8981800-8987400	Weak transcription	Esophagus	oesophagus
14	chr12:8982000-8985000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr12:8982200-9022000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr12:8982600-8983600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr12:8982600-8983800	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr12:8982600-8984600	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr12:8982600-8988000	Weak transcription	K562	blood
20	chr12:8983000-8984400	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr12:8983200-8984000	Enhancers	Primary neutrophils fromperipheralblood	blood
22	chr12:8983200-8985800	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr12:8983200-8986400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr12:8983400-8984000	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr12:8983400-9017600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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