Variant report

Variant	rs73038726
Chromosome Location	chr12:8995686-8995687
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:8995660-8995710	GM12891	blood:	n/a
2	chr12:8995660-8995710	HCM	heart:	n/a
3	chr12:8995660-8995710	Hepatocyte	liver:	n/a
4	chr12:8995660-8995710	GM12892	blood:	n/a
5	chr12:8995660-8995710	PFSK-1	brain:	n/a
6	chr12:8995660-8995710	H1-hESC	embryonic stem cell:	embryo
7	chr12:8995660-8995710	MCF-7	breast:	n/a
8	chr12:8995660-8995710	AG04450	lung:	fetal
9	chr12:8995660-8995710	AG09309	skin:	n/a
10	chr12:8995660-8995710	HRE	kidney:	n/a
11	chr12:8995660-8995710	NH-A	brain:	n/a
12	chr12:8995660-8995710	PANC-1	pancreas:	n/a
13	chr12:8995660-8995710	NHBE	bronchial:	n/a
14	chr12:8995660-8995710	Hela-S3	cervix:	n/a
15	chr12:8995660-8995710	SKMC	muscle:	n/a
16	chr12:8995660-8995710	K562	blood:	n/a
17	chr12:8995660-8995710	HCF	heart:	n/a
18	chr12:8995660-8995710	HAEpiC	amniotic membrane:	n/a
19	chr12:8995660-8995710	SK-N-MC	brain:	n/a
20	chr12:8995660-8995710	HepG2	liver:	n/a
21	chr12:8995660-8995710	HCPEpiC	choroid plexus:	n/a
22	chr12:8995660-8995710	HUVEC	blood vessel:	n/a
23	chr12:8995660-8995710	GM19239	blood:	n/a
24	chr12:8995660-8995710	MCF10A-Er-Src	breast:	n/a
25	chr12:8995660-8995710	RPTEC	kidney:	n/a
26	chr12:8995660-8995710	ProgFib	skin:	n/a
27	chr12:8995660-8995710	BE2_C	brain:	n/a
28	chr12:8995660-8995710	HRPEpiC	eye:	n/a
29	chr12:8995660-8995710	HIPEpiC	eye:	n/a
30	chr12:8995660-8995710	GM12878	blood:	n/a
31	chr12:8995660-8995710	AG10803	skin:	n/a
32	chr12:8995660-8995710	HEEpiC	esophagus:	n/a
33	chr12:8995660-8995710	HCT-116	colon:	n/a
34	chr12:8995660-8995710	NHDF-neo	bronchial:	n/a
35	chr12:8995660-8995710	SK-N-SH_RA	brain:	n/a
36	chr12:8995660-8995710	Jurkat	blood:	n/a
37	chr12:8995660-8995710	IMR90	lung:	fetal
38	chr12:8995660-8995710	A549	lung:	n/a
39	chr12:8995660-8995710	T-47D	breast:	n/a
40	chr12:8995660-8995710	AG09319	gingival:	n/a
41	chr12:8995660-8995710	AG04449	skin:	fetal
42	chr12:8995660-8995710	SAEC	small airway:	n/a
43	chr12:8995660-8995710	HRCEpiC	kidney:	n/a
44	chr12:8995660-8995710	NB4	blood:	n/a
45	chr12:8995660-8995710	HPAEpiC	pulmonary alveolar:	n/a
46	chr12:8995660-8995710	ovcar-3	ovarian:	n/a
47	chr12:8995660-8995710	AoSMC	blood vessel:	n/a
48	chr12:8995660-8995710	U87	brain:	n/a
49	chr12:8995660-8995710	GM06990	blood:	n/a
50	chr12:8995660-8995710	BJ	skin:	n/a

No data

Variant related genes	Relation type
A2ML1	CpG island

rs_ID	r²[population]
rs11047500	1.00[EUR][1000 genomes]
rs56046421	1.00[AMR][1000 genomes]
rs56094803	1.00[EUR][1000 genomes]
rs56837371	1.00[EUR][1000 genomes]
rs57676185	1.00[EUR][1000 genomes]
rs58642152	1.00[EUR][1000 genomes]
rs59824700	1.00[EUR][1000 genomes]
rs60331702	1.00[EUR][1000 genomes]
rs61054720	1.00[EUR][1000 genomes]
rs61431903	1.00[EUR][1000 genomes]
rs6487353	1.00[EUR][1000 genomes]
rs73036906	1.00[EUR][1000 genomes]
rs73036961	1.00[AMR][1000 genomes]
rs73036962	1.00[AMR][1000 genomes]
rs73036963	1.00[AMR][1000 genomes]
rs73036972	1.00[AMR][1000 genomes]
rs73036979	1.00[AMR][1000 genomes]
rs73036986	1.00[AMR][1000 genomes]
rs73036991	1.00[AMR][1000 genomes]
rs73036994	1.00[AMR][1000 genomes]
rs73036998	1.00[AMR][1000 genomes]
rs73036999	1.00[AMR][1000 genomes]
rs73037000	1.00[AMR][1000 genomes]
rs73037001	1.00[AMR][1000 genomes]
rs73037002	1.00[AMR][1000 genomes]
rs74059961	1.00[EUR][1000 genomes]
rs74059963	1.00[EUR][1000 genomes]
rs74059967	1.00[EUR][1000 genomes]
rs74059969	1.00[EUR][1000 genomes]
rs74059992	1.00[EUR][1000 genomes]
rs74061818	1.00[EUR][1000 genomes]
rs7960582	1.00[EUR][1000 genomes]
rs7968935	1.00[EUR][1000 genomes]
rs7972763	1.00[EUR][1000 genomes]
rs7975293	1.00[EUR][1000 genomes]

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8982200-9022000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:8983400-9017600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr12:8983800-8999800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr12:8987600-9004200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr12:8987600-9040000	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr12:8987800-9002800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr12:8987800-9004800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr12:8987800-9012800	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr12:8988200-9012800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr12:8989000-8997000	Weak transcription	Esophagus	oesophagus
11	chr12:8992400-8997200	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr12:8992400-8997200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr12:8994000-8996000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:8994400-8997000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr12:8994800-8997000	Weak transcription	K562	blood
16	chr12:8994800-9016600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr12:8995200-8996200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr12:8995400-8996000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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