Variant report

Variant	rs73052907
Chromosome Location	chr7:14852984-14852985
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs55764819	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55816881	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56212561	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052903	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052908	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052909	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052910	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052913	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052917	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73052962	1.00[AMR][1000 genomes]
rs73064713	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064716	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064724	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064725	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064731	1.00[EUR][1000 genomes]
rs73064732	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064753	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064764	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064770	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73064779	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73068689	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73068691	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73068699	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070732	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070751	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070752	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070758	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070760	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070764	1.00[EUR][1000 genomes]
rs73070767	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070769	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070771	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070773	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070775	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73070778	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1031041	chr7:14624127-14999201	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv538741	chr7:14624127-14999201	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1020722	chr7:14792114-14871907	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14847400-14861400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:14852800-14853000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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