Variant report

Variant	rs73052962
Chromosome Location	chr7:14877126-14877127
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs55764819	1.00[AMR][1000 genomes]
rs55816881	1.00[AMR][1000 genomes]
rs56212561	1.00[AMR][1000 genomes]
rs73052903	1.00[AMR][1000 genomes]
rs73052907	1.00[AMR][1000 genomes]
rs73052908	1.00[AMR][1000 genomes]
rs73052909	1.00[AMR][1000 genomes]
rs73052910	1.00[AMR][1000 genomes]
rs73052913	1.00[AMR][1000 genomes]
rs73052917	1.00[AMR][1000 genomes]
rs73064713	1.00[AMR][1000 genomes]
rs73064716	1.00[AMR][1000 genomes]
rs73064724	1.00[AMR][1000 genomes]
rs73064725	1.00[AMR][1000 genomes]
rs73064729	1.00[AMR][1000 genomes]
rs73064732	1.00[AMR][1000 genomes]
rs73064753	1.00[AMR][1000 genomes]
rs73064764	1.00[AMR][1000 genomes]
rs73064770	1.00[AMR][1000 genomes]
rs73064779	1.00[AMR][1000 genomes]
rs73068689	1.00[AMR][1000 genomes]
rs73068691	1.00[AMR][1000 genomes]
rs73068699	1.00[AMR][1000 genomes]
rs73070729	1.00[AMR][1000 genomes]
rs73070732	1.00[AMR][1000 genomes]
rs73070751	1.00[AMR][1000 genomes]
rs73070752	1.00[AMR][1000 genomes]
rs73070758	1.00[AMR][1000 genomes]
rs73070760	1.00[AMR][1000 genomes]
rs73070767	1.00[AMR][1000 genomes]
rs73070769	1.00[AMR][1000 genomes]
rs73070771	1.00[AMR][1000 genomes]
rs73070773	1.00[AMR][1000 genomes]
rs73070775	1.00[AMR][1000 genomes]
rs73070778	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031041	chr7:14624127-14999201	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv538741	chr7:14624127-14999201	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14872400-14877600	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr7:14873200-14877600	Enhancers	Placenta Amnion	Placenta Amnion
3	chr7:14873400-14881200	Weak transcription	NHLF	lung
4	chr7:14873600-14877200	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr7:14874000-14877600	Enhancers	H1 Cell Line	embryonic stem cell
6	chr7:14874400-14878200	Weak transcription	Brain Anterior Caudate	brain
7	chr7:14875400-14886200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr7:14876200-14877400	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr7:14876200-14877600	Enhancers	Fetal Heart	heart
10	chr7:14876400-14877400	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr7:14876600-14877600	Enhancers	Osteobl	bone
12	chr7:14876600-14879600	Weak transcription	NHDF-Ad	bronchial
13	chr7:14876800-14877200	Enhancers	NH-A	brain
14	chr7:14876800-14877600	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr7:14877000-14877800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr7:14877000-14879800	Enhancers	Muscle Satellite Cultured Cells	--
17	chr7:14877000-14880400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr7:14877000-14880400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr7:14877000-14880400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr7:14877000-14881000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr7:14877000-14883200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr7:14877000-14886000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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