Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:28766522..28768884-chr3:28770600..28772743,2	K562	blood:
2	chr3:28769982..28772713-chr3:28775617..28777736,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10510614	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11718080	0.83[ASN][1000 genomes]
rs11925269	0.89[ASN][1000 genomes]
rs1381393	0.81[ASN][1000 genomes]
rs17021806	0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17021860	0.85[ASN][1000 genomes]
rs4258916	0.81[ASN][1000 genomes]
rs4315650	0.81[ASN][1000 genomes]
rs4530489	0.81[ASN][1000 genomes]
rs4624524	0.81[ASN][1000 genomes]
rs55859567	0.81[ASN][1000 genomes]
rs56212205	0.85[ASN][1000 genomes]
rs56299573	0.85[ASN][1000 genomes]
rs58150312	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59333989	0.89[ASN][1000 genomes]
rs60699441	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61287529	0.89[ASN][1000 genomes]
rs6549874	0.83[ASN][1000 genomes]
rs6549878	0.83[ASN][1000 genomes]
rs6549880	0.83[ASN][1000 genomes]
rs6549881	0.81[ASN][1000 genomes]
rs66697705	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67946732	0.85[ASN][1000 genomes]
rs6804117	0.81[ASN][1000 genomes]
rs73054642	0.89[ASN][1000 genomes]
rs73065090	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73066922	0.83[ASN][1000 genomes]
rs9875435	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3328565	chr3:27991169-28915035	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv916364	chr3:28468275-29146280	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1001920	chr3:28711075-28788920	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:28772400-28777600	Weak transcription	Aorta	Aorta

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