Variant report

Variant rs73066984
Chromosome Location chr19:52465729-52465730
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52449600-52468000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr19:52457600-52467600 Weak transcription H1 Cell Line embryonic stem cell
3 chr19:52460400-52465800 Enhancers HepG2 liver
4 chr19:52461800-52466800 Weak transcription Fetal Kidney kidney
5 chr19:52462800-52466400 Weak transcription Brain Angular Gyrus brain
6 chr19:52463400-52488200 ZNF genes & repeats Adipose Nuclei Adipose
7 chr19:52463400-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr19:52463400-52489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
9 chr19:52463800-52488200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
10 chr19:52464000-52467600 Weak transcription Fetal Muscle Trunk muscle
11 chr19:52464000-52468000 Weak transcription Right Ventricle heart
12 chr19:52464200-52466400 Weak transcription Placenta Placenta
13 chr19:52464200-52467600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr19:52464400-52465800 ZNF genes & repeats Brain Hippocampus Middle brain
15 chr19:52464400-52466000 ZNF genes & repeats Stomach Smooth Muscle stomach
16 chr19:52464400-52468200 Weak transcription H9 Cell Line embryonic stem cell
17 chr19:52464400-52469800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
18 chr19:52464400-52480000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
19 chr19:52464400-52488200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
20 chr19:52464400-52488400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
21 chr19:52464400-52488800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
22 chr19:52464600-52466000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr19:52464600-52466400 ZNF genes & repeats Aorta Aorta
24 chr19:52464600-52466400 Weak transcription Placenta Amnion Placenta Amnion
25 chr19:52464600-52466600 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
26 chr19:52464600-52467800 Weak transcription HSMMtube muscle
27 chr19:52464600-52468000 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr19:52464600-52479800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
29 chr19:52464600-52483800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr19:52464600-52488000 ZNF genes & repeats Duodenum Mucosa Duodenum
31 chr19:52464600-52488800 ZNF genes & repeats Liver Liver
32 chr19:52464800-52465800 Strong transcription Brain Germinal Matrix brain
33 chr19:52464800-52466600 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr19:52464800-52467800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:52464800-52467800 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr19:52464800-52468200 Weak transcription Fetal Heart heart
37 chr19:52464800-52468400 Strong transcription Dnd41 blood
38 chr19:52464800-52478600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr19:52465000-52465800 ZNF genes & repeats Brain Anterior Caudate brain
40 chr19:52465000-52478600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr19:52465000-52478600 ZNF genes & repeats Primary B cells from cord blood blood
42 chr19:52465000-52483600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr19:52465000-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr19:52465200-52465800 ZNF genes & repeats HSMM muscle
45 chr19:52465200-52466000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
46 chr19:52465200-52466400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
47 chr19:52465200-52466400 ZNF genes & repeats Colonic Mucosa Colon
48 chr19:52465200-52466400 ZNF genes & repeats Fetal Stomach stomach
49 chr19:52465200-52466400 ZNF genes & repeats Left Ventricle heart
50 chr19:52465200-52466600 ZNF genes & repeats Lung lung

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