Variant report

Variant	rs73072819
Chromosome Location	chr12:29977830-29977831
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10466814	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11050507	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12304858	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12310540	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12314833	1.00[AMR][1000 genomes]
rs2101263	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73069881	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73069894	1.00[EUR][1000 genomes]
rs73069898	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73069900	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071178	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071181	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071202	1.00[EUR][1000 genomes]
rs73071616	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073108	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073117	1.00[EUR][1000 genomes]
rs73073125	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073197	1.00[EUR][1000 genomes]
rs73075104	1.00[EUR][1000 genomes]
rs73075111	1.00[EUR][1000 genomes]
rs73075116	1.00[EUR][1000 genomes]
rs73075118	1.00[EUR][1000 genomes]
rs73075125	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73079439	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529328	chr12:29692414-30246209	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv898953	chr12:29905322-29989292	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv469191	chr12:29939628-30098770	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv557958	chr12:29939628-30098770	ZNF genes & repeats Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:29977800-29978400	Enhancers	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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