Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFYB	chr12:30473570-30473848	K562	blood:	n/a	n/a
2	NFYA	chr12:30473621-30473844	K562	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000257932	TF binding region

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12302529	1.00[EUR][1000 genomes]
rs12307087	1.00[EUR][1000 genomes]
rs58374057	1.00[EUR][1000 genomes]
rs73073976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073979	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073990	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73073998	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73075843	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075845	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075846	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075848	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075849	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075850	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73075854	1.00[EUR][1000 genomes]
rs73077754	1.00[EUR][1000 genomes]
rs73079866	1.00[EUR][1000 genomes]
rs73079882	1.00[EUR][1000 genomes]
rs73081831	1.00[EUR][1000 genomes]
rs73088524	1.00[EUR][1000 genomes]
rs73088540	1.00[EUR][1000 genomes]
rs73090544	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832360	chr12:30393329-30555693	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv517916	chr12:30454845-30485611	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv3343291	chr12:30455597-30992837	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
4	esv33180	chr12:30471617-30478229	Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:30471400-30476000	Weak transcription	Gastric	stomach

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