Variant report

Variant	rs73081831
Chromosome Location	chr12:30625774-30625775
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs12302529	1.00[EUR][1000 genomes]
rs12307087	1.00[EUR][1000 genomes]
rs58374057	1.00[EUR][1000 genomes]
rs73073973	1.00[EUR][1000 genomes]
rs73073976	1.00[EUR][1000 genomes]
rs73073979	1.00[EUR][1000 genomes]
rs73073983	1.00[EUR][1000 genomes]
rs73073990	1.00[EUR][1000 genomes]
rs73073995	1.00[EUR][1000 genomes]
rs73073998	1.00[EUR][1000 genomes]
rs73075843	1.00[EUR][1000 genomes]
rs73075845	1.00[EUR][1000 genomes]
rs73075846	1.00[EUR][1000 genomes]
rs73075848	1.00[EUR][1000 genomes]
rs73075849	1.00[EUR][1000 genomes]
rs73075850	1.00[EUR][1000 genomes]
rs73075854	1.00[EUR][1000 genomes]
rs73077754	1.00[EUR][1000 genomes]
rs73079866	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73079882	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73081846	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73081852	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73081855	1.00[AMR][1000 genomes]
rs73081858	1.00[AMR][1000 genomes]
rs73081860	1.00[AMR][1000 genomes]
rs73081871	1.00[AMR][1000 genomes]
rs73081875	1.00[AMR][1000 genomes]
rs73081877	1.00[AMR][1000 genomes]
rs73081879	1.00[AMR][1000 genomes]
rs73081883	1.00[AMR][1000 genomes]
rs73081886	1.00[AMR][1000 genomes]
rs73081888	1.00[AMR][1000 genomes]
rs73081889	1.00[AMR][1000 genomes]
rs73081890	1.00[AMR][1000 genomes]
rs73081893	1.00[AMR][1000 genomes]
rs73081894	1.00[AMR][1000 genomes]
rs73081897	1.00[AMR][1000 genomes]
rs73081899	1.00[AMR][1000 genomes]
rs73081901	1.00[AMR][1000 genomes]
rs73083703	1.00[AMR][1000 genomes]
rs73083706	1.00[AMR][1000 genomes]
rs73083708	1.00[AMR][1000 genomes]
rs73083710	1.00[AMR][1000 genomes]
rs73083712	1.00[AMR][1000 genomes]
rs73083714	1.00[AMR][1000 genomes]
rs73083721	1.00[AMR][1000 genomes]
rs73083722	1.00[AMR][1000 genomes]
rs73083728	1.00[AMR][1000 genomes]
rs73083729	1.00[AMR][1000 genomes]
rs73083733	1.00[AMR][1000 genomes]
rs73083734	1.00[AMR][1000 genomes]
rs73083735	1.00[AMR][1000 genomes]
rs73083744	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3343291	chr12:30455597-30992837	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv1050233	chr12:30590071-30670919	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:30624800-30635400	Weak transcription	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links