Variant report

Variant	rs73076218
Chromosome Location	chr1:215099463-215099464
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10864140	1.00[ASN][1000 genomes]
rs11120431	0.88[EUR][1000 genomes]
rs11120443	1.00[ASN][1000 genomes]
rs12071211	1.00[ASN][1000 genomes]
rs12117161	1.00[ASN][1000 genomes]
rs12120735	0.81[EUR][1000 genomes]
rs12122103	0.90[EUR][1000 genomes]
rs12125500	1.00[EUR][1000 genomes]
rs12125537	1.00[ASN][1000 genomes]
rs12129708	0.81[EUR][1000 genomes]
rs12132378	0.88[EUR][1000 genomes]
rs12137826	1.00[ASN][1000 genomes]
rs12402856	0.90[EUR][1000 genomes]
rs17023849	1.00[ASN][1000 genomes]
rs17601260	1.00[ASN][1000 genomes]
rs2601653	1.00[ASN][1000 genomes]
rs28473621	0.90[EUR][1000 genomes]
rs28581514	0.90[EUR][1000 genomes]
rs478014	1.00[ASN][1000 genomes]
rs486282	1.00[ASN][1000 genomes]
rs498942	1.00[ASN][1000 genomes]
rs502241	1.00[ASN][1000 genomes]
rs6690671	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873167	chr1:214950361-215116947	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215099400-215100200	Enhancers	Stomach Mucosa	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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