Variant report

Variant	rs73087356
Chromosome Location	chr3:195635855-195635856
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:195635722-195636120	GM12878	blood:	n/a	n/a
2	MXI1	chr3:195634465-195637159	SK-N-SH	brain:	n/a	chr3:195635673-195635682 chr3:195634896-195634905
3	UBTF	chr3:195635807-195636053	K562	blood:	n/a	n/a
4	MAX	chr3:195635777-195636975	K562	blood:	n/a	n/a
5	POLR2A	chr3:195635723-195636107	GM12878	blood:	n/a	n/a
6	POLR2A	chr3:195635785-195636988	GM15510	blood:	n/a	n/a
7	POLR2A	chr3:195635829-195635931	Hela-S3	cervix:	n/a	n/a
8	PAX5	chr3:195635765-195636154	GM12892	blood:	n/a	n/a
9	POLR2A	chr3:195635831-195636072	HUVEC	blood vessel:	n/a	n/a
10	ZBTB7A	chr3:195635402-195636942	K562	blood:	n/a	chr3:195636361-195636369 chr3:195636360-195636368
11	MAX	chr3:195635799-195637376	MCF-7	breast:	n/a	n/a
12	POLR2A	chr3:195635855-195636944	GM10847	blood:	n/a	n/a
13	MAX	chr3:195634575-195636997	ECC-1	luminal epithelium:	n/a	chr3:195634895-195634904
14	E2F6	chr3:195635813-195636121	K562	blood:	n/a	chr3:195635848-195635857
15	SMARCB1	chr3:195635833-195637285	Hela-S3	cervix:	n/a	n/a
16	POLR2A	chr3:195635736-195637380	K562	blood:	n/a	n/a
17	POLR2A	chr3:195635798-195637021	GM18505	blood:	n/a	n/a
18	POLR2A	chr3:195633119-195637008	GM19193	blood:	n/a	n/a
19	POLR2A	chr3:195632863-195637021	GM19099	blood:	n/a	n/a
20	MXI1	chr3:195634681-195637229	IMR90	lung:	n/a	chr3:195635673-195635682 chr3:195634896-195634905
21	CHD2	chr3:195635771-195636031	Hela-S3	cervix:	n/a	chr3:195635821-195635831
22	HCFC1	chr3:195635723-195637233	Hela-S3	cervix:	n/a	n/a
23	ZBTB7A	chr3:195634802-195637031	ECC-1	luminal epithelium:	n/a	chr3:195636361-195636369 chr3:195636360-195636368
24	MAZ	chr3:195634499-195637390	K562	blood:	n/a	chr3:195634895-195634904
25	YY1	chr3:195635796-195636083	K562	blood:	n/a	chr3:195635937-195635951 chr3:195636033-195636047
26	EP300	chr3:195635265-195636459	T-47D	breast:	n/a	chr3:195635785-195635801 chr3:195636136-195636152 chr3:195635792-195635808 chr3:195636027-195636043 chr3:195635772-195635788 chr3:195635937-195635953 chr3:195636264-195636280 chr3:195635998-195636014
27	MAZ	chr3:195635783-195637451	IMR90	lung:	n/a	n/a
28	HA-E2F1	chr3:195635802-195637006	Hela-S3	cervix:	n/a	chr3:195635848-195635857 chr3:195636641-195636650
29	ZBTB7A	chr3:195635309-195637119	ECC-1	luminal epithelium:	n/a	chr3:195636361-195636369 chr3:195636360-195636368
30	MAZ	chr3:195635812-195637239	Hela-S3	cervix:	n/a	n/a
31	POLR2A	chr3:195635787-195636978	A549	lung:	n/a	n/a
32	UBTF	chr3:195634774-195636977	K562	blood:	n/a	n/a
33	HMGN3	chr3:195634779-195637407	K562	blood:	n/a	n/a
34	POLR2A	chr3:195633297-195637009	GM18951	blood:	n/a	n/a
35	SIN3AK20	chr3:195635739-195636416	PANC-1	pancreas:	n/a	n/a
36	MAX	chr3:195635761-195637253	HepG2	liver:	n/a	n/a
37	CCNT2	chr3:195634640-195636955	K562	blood:	n/a	chr3:195636046-195636055 chr3:195636663-195636672
38	MAZ	chr3:195635590-195637031	GM12878	blood:	n/a	n/a
39	ELF1	chr3:195633966-195636117	GM12878	blood:	n/a	n/a
40	POLR2A	chr3:195633207-195636992	GM18526	blood:	n/a	n/a
41	POLR2A	chr3:195633710-195637042	Raji	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:195409239..195411118-chr3:195634886..195637681,2	K562	blood:
2	chr3:195602309..195605964-chr3:195633937..195639111,7	MCF-7	breast:
3	chr3:195635569..195638518-chr3:195807424..195810696,3	MCF-7	breast:
4	chr3:195620885..195622532-chr3:195635337..195638039,2	K562	blood:
5	chr3:195634985..195639388-chr3:195640414..195643668,6	K562	blood:
6	chr3:195586183..195589245-chr3:195634778..195636892,3	MCF-7	breast:
7	chr3:195601233..195610120-chr3:195632410..195638442,11	MCF-7	breast:
8	chr17:57922900..57925382-chr3:195635106..195637733,2	MCF-7	breast:
9	chr3:195623300..195626521-chr3:195635118..195637851,4	K562	blood:

Variant related genes	Relation type
ENSG00000226155	TF binding region
ENSG00000061938	Chromatin interaction
ENSG00000273009	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000072274	Chromatin interaction
ENSG00000223783	Chromatin interaction
ENSG00000242086	Chromatin interaction

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10881557	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10881558	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11717090	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11719343	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11720557	0.81[ASN][1000 genomes]
rs12491124	0.92[ASN][1000 genomes]
rs12491213	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12494665	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61058949	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6785122	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6791922	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73087352	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7340710	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7355913	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7634904	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9866046	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9880526	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv1001387	chr3:195186128-195661538	Bivalent Enhancer Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	49 gene(s)	inside rSNPs	diseases
3	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
5	nsv1006217	chr3:195312401-195643229	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
6	nsv536882	chr3:195312401-195643229	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
7	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
8	nsv1006165	chr3:195383130-195777211	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
9	nsv471621	chr3:195417664-195795474	Flanking Active TSS Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
10	esv2751988	chr3:195433543-195651349	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
11	esv2756651	chr3:195433543-195696720	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
12	nsv432528	chr3:195433543-195696720	Enhancers Strong transcription ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
13	esv2754016	chr3:195433543-195753766	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
14	nsv822410	chr3:195438740-195725565	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
15	nsv878162	chr3:195475989-195641908	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
16	nsv878163	chr3:195477791-195641908	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
17	nsv997893	chr3:195501392-195642192	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
18	nsv1005193	chr3:195526571-195709662	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
19	nsv878167	chr3:195550366-195637439	Enhancers Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
20	nsv878168	chr3:195553259-195644332	Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
21	nsv1002591	chr3:195564086-195643229	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
22	nsv530397	chr3:195565159-195740416	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
23	nsv593056	chr3:195571024-195656731	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
24	nsv1007235	chr3:195582468-195651911	Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
25	nsv1002629	chr3:195582468-195769275	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
26	esv1811906	chr3:195598137-195637469	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
27	nsv1014602	chr3:195606770-195661538	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
28	nsv829827	chr3:195608866-195760829	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
29	nsv469518	chr3:195623722-195795474	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
30	nsv482784	chr3:195623722-195795474	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
31	nsv1011404	chr3:195627654-195656614	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
32	esv1797272	chr3:195628636-195636469	Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
33	esv1803975	chr3:195628636-195636469	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
34	nsv593057	chr3:195633438-195636469	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
35	nsv593058	chr3:195635257-195636667	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
36	esv3486423	chr3:195635405-195637853	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
37	esv3486424	chr3:195635405-195637853	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
38	esv15170	chr3:195635658-195636770	Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
39	nsv593059	chr3:195635686-195636356	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
40	nsv593060	chr3:195635686-195636469	Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
41	nsv593061	chr3:195635686-195636667	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
42	nsv593062	chr3:195635737-195636469	Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
43	nsv593063	chr3:195635737-195636667	Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
44	nsv593064	chr3:195635737-195637099	Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
45	nsv593065	chr3:195635847-195636469	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
46	nsv593066	chr3:195635847-195636667	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
47	esv1814210	chr3:195635847-195637439	Flanking Active TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
48	esv1817545	chr3:195635847-195637439	Active TSS Flanking Active TSS Genic enhancers Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
49	esv1830473	chr3:195635847-195637439	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
50	esv1841457	chr3:195635847-195637439	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195632600-195637200	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr3:195633000-195636000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:195633000-195636000	Flanking Active TSS	Dnd41	blood
4	chr3:195633200-195636200	Flanking Active TSS	Primary hematopoietic stem cells	blood
5	chr3:195633600-195636000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr3:195633600-195636000	Flanking Active TSS	Adipose Nuclei	Adipose
7	chr3:195633600-195636000	Flanking Active TSS	Stomach Smooth Muscle	stomach
8	chr3:195634000-195636000	Flanking Active TSS	Colonic Mucosa	Colon
9	chr3:195634200-195636000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
10	chr3:195634400-195636800	Active TSS	Small Intestine	intestine
11	chr3:195634600-195637200	Active TSS	Psoas Muscle	Psoas
12	chr3:195634800-195636800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr3:195635000-195636800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr3:195635000-195636800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr3:195635000-195636800	Active TSS	Thymus	Thymus
16	chr3:195635000-195637000	Active TSS	A549	lung
17	chr3:195635000-195637200	Active TSS	Fetal Kidney	kidney
18	chr3:195635200-195636000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr3:195635200-195636800	Active TSS	Primary T cells from cord blood	blood
20	chr3:195635200-195636800	Active TSS	Brain Hippocampus Middle	brain
21	chr3:195635200-195636800	Active TSS	Brain Substantia Nigra	brain
22	chr3:195635200-195637000	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr3:195635200-195637000	Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr3:195635200-195637000	Active TSS	Brain Cingulate Gyrus	brain
25	chr3:195635200-195637200	Active TSS	H9 Cell Line	embryonic stem cell
26	chr3:195635200-195637200	Active TSS	Aorta	Aorta
27	chr3:195635400-195636000	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr3:195635400-195636000	Active TSS	Primary monocytes fromperipheralblood	blood
29	chr3:195635400-195636000	Active TSS	Primary T killer memory cells from peripheral blood	blood
30	chr3:195635400-195636800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr3:195635400-195636800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr3:195635400-195636800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
33	chr3:195635400-195636800	Active TSS	Breast Myoepithelial Primary Cells	Breast
34	chr3:195635400-195636800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr3:195635400-195636800	Active TSS	Primary neutrophils fromperipheralblood	blood
36	chr3:195635400-195636800	Active TSS	Primary B cells from peripheral blood	blood
37	chr3:195635400-195636800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr3:195635400-195636800	Active TSS	Primary T helper naive cells fromperipheralblood	blood
39	chr3:195635400-195636800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
40	chr3:195635400-195636800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr3:195635400-195636800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
42	chr3:195635400-195636800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr3:195635400-195636800	Active TSS	Brain Angular Gyrus	brain
44	chr3:195635400-195636800	Active TSS	Brain Anterior Caudate	brain
45	chr3:195635400-195636800	Active TSS	Brain Inferior Temporal Lobe	brain
46	chr3:195635400-195636800	Active TSS	Left Ventricle	heart
47	chr3:195635400-195636800	Active TSS	GM12878-XiMat	blood
48	chr3:195635400-195636800	Active TSS	HepG2	liver
49	chr3:195635400-195636800	Active TSS	HMEC	breast
50	chr3:195635400-195636800	Active TSS	HSMM	muscle

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