The 2.0 version of rSNPBase

Variant report

Variant rs73092358
Chromosome Location chr1:214530452-214530453
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:214503200-214537800 Weak transcription Gastric stomach
3 chr1:214504600-214533200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:214508400-214535000 Weak transcription Esophagus oesophagus
5 chr1:214511400-214531200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:214512000-214537000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:214513600-214552200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:214514000-214537800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:214515400-214542600 Weak transcription Brain Substantia Nigra brain
10 chr1:214518400-214537800 Weak transcription Fetal Brain Male brain
11 chr1:214519000-214533800 Weak transcription Duodenum Mucosa Duodenum
12 chr1:214519000-214557800 Weak transcription Dnd41 blood
13 chr1:214519200-214577200 Weak transcription Primary hematopoietic stem cells blood
14 chr1:214521200-214537600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:214521600-214531000 Weak transcription Hela-S3 cervix
16 chr1:214522800-214552800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:214523400-214540800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:214524400-214535400 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:214524400-214574400 Weak transcription Brain Hippocampus Middle brain
20 chr1:214524800-214531600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:214524800-214532200 Strong transcription HUVEC blood vessel
22 chr1:214524800-214534800 Strong transcription Muscle Satellite Cultured Cells --
23 chr1:214524800-214535200 Strong transcription NH-A brain
24 chr1:214524800-214535400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:214524800-214537800 Strong transcription NHEK skin
26 chr1:214524800-214539200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:214525000-214534800 Strong transcription HSMM muscle
28 chr1:214525000-214535600 Strong transcription NHDF-Ad bronchial
29 chr1:214525000-214537000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:214525600-214540000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:214525800-214532200 Strong transcription HMEC breast
32 chr1:214526000-214534000 Weak transcription Right Ventricle heart
33 chr1:214526000-214538600 Strong transcription Stomach Smooth Muscle stomach
34 chr1:214526000-214544600 Weak transcription Spleen Spleen
35 chr1:214526400-214537200 Strong transcription Fetal Muscle Trunk muscle
36 chr1:214526400-214542400 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:214526600-214531600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:214526600-214535000 Weak transcription Fetal Heart heart
39 chr1:214526800-214531600 Strong transcription NHLF lung
40 chr1:214526800-214535400 Strong transcription Fetal Muscle Leg muscle
41 chr1:214527000-214535000 Strong transcription Osteobl bone
42 chr1:214527400-214540600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:214527600-214531200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:214527600-214531200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:214527800-214542400 Weak transcription HepG2 liver
46 chr1:214528400-214535600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:214528600-214531400 Strong transcription Fetal Lung lung
48 chr1:214528600-214531800 Strong transcription Fetal Intestine Large intestine
49 chr1:214528600-214539800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:214528600-214552800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015