Variant report
| Variant | rs73101396 |
|---|---|
| Chromosome Location | chr3:68599215-68599216 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:31)
| rs_ID | r2[population] |
|---|---|
| rs11721243 | 0.85[ASN][1000 genomes] |
| rs13319937 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs13321458 | 0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1398063 | 0.85[ASN][1000 genomes] |
| rs1398065 | 0.85[EUR][1000 genomes] |
| rs1398071 | 0.85[ASN][1000 genomes] |
| rs1511907 | 0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[ASN][1000 genomes] |
| rs2202334 | 0.81[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs6804831 | 0.83[AFR][1000 genomes] |
| rs73098738 | 0.85[ASN][1000 genomes] |
| rs73098744 | 0.85[ASN][1000 genomes] |
| rs73098747 | 0.85[ASN][1000 genomes] |
| rs73098748 | 0.85[ASN][1000 genomes] |
| rs874817 | 0.85[ASN][1000 genomes] |
| rs874818 | 0.85[ASN][1000 genomes] |
| rs874819 | 0.85[ASN][1000 genomes] |
| rs874820 | 0.85[ASN][1000 genomes] |
| rs9310118 | 0.83[AFR][1000 genomes];0.86[ASN][1000 genomes] |
| rs9810990 | 0.85[ASN][1000 genomes] |
| rs9826377 | 0.85[ASN][1000 genomes] |
| rs9835386 | 0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9838903 | 0.85[ASN][1000 genomes] |
| rs9857983 | 0.85[ASN][1000 genomes] |
| rs9858470 | 0.85[ASN][1000 genomes] |
| rs9859225 | 0.85[ASN][1000 genomes] |
| rs9859249 | 0.85[ASN][1000 genomes] |
| rs9860873 | 0.81[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs9864780 | 0.81[AFR][1000 genomes];0.85[ASN][1000 genomes] |
| rs9867536 | 0.85[ASN][1000 genomes] |
| rs9872808 | 0.85[ASN][1000 genomes] |
| rs9875703 | 0.85[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv1832396 | chr3:68478762-68641509 | Enhancers Weak transcription ZNF genes & repeats Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | esv1828578 | chr3:68595321-68641509 | Enhancers Weak transcription ZNF genes & repeats | n/a | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:68599000-68599600 | Enhancers | H9 Cell Line | embryonic stem cell |
