The 2.0 version of rSNPBase

Variant report

Variant rs73106346
Chromosome Location chr12:40637294-40637295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:40619400-40644400 Weak transcription Gastric stomach
2 chr12:40619600-40661000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:40619600-40678400 Weak transcription Right Ventricle heart
4 chr12:40619800-40658800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr12:40620400-40644200 Weak transcription Brain Angular Gyrus brain
6 chr12:40620800-40644200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr12:40620800-40648000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr12:40620800-40659200 Weak transcription Brain Anterior Caudate brain
9 chr12:40620800-40704200 Weak transcription Esophagus oesophagus
10 chr12:40621000-40643800 Weak transcription Stomach Smooth Muscle stomach
11 chr12:40621000-40659800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr12:40621000-40661200 Weak transcription Rectal Smooth Muscle rectum
13 chr12:40622800-40661000 Weak transcription Colon Smooth Muscle Colon
14 chr12:40622800-40708800 Weak transcription Left Ventricle heart
15 chr12:40630600-40643600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr12:40630600-40669400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr12:40630600-40686400 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr12:40631200-40646600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:40632000-40655200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr12:40632000-40656000 Strong transcription Primary monocytes fromperipheralblood blood
21 chr12:40633200-40643800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr12:40633400-40646600 Weak transcription Ovary ovary
23 chr12:40633400-40654200 Weak transcription Aorta Aorta
24 chr12:40635000-40640400 Weak transcription Pancreas Pancrea
25 chr12:40635000-40640400 Weak transcription Spleen Spleen
26 chr12:40635000-40647400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr12:40635000-40647400 Weak transcription Lung lung
28 chr12:40635200-40648200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr12:40636000-40640400 Weak transcription A549 lung
30 chr12:40636200-40648000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr12:40636200-40648200 Weak transcription NHDF-Ad bronchial
32 chr12:40636400-40643600 Weak transcription Adipose Nuclei Adipose
33 chr12:40637000-40637400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr12:40637000-40637400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr12:40637000-40637400 Flanking Active TSS Liver Liver
36 chr12:40637200-40637400 Genic enhancers Primary B cells from peripheral blood blood
37 chr12:40637200-40637400 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr12:40637200-40638200 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015