Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11069093	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12302664	0.89[ASN][1000 genomes]
rs12312645	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs12316636	1.00[ASN][1000 genomes]
rs34289882	0.83[EUR][1000 genomes]
rs35246951	0.86[EUR][1000 genomes]
rs35814276	0.83[EUR][1000 genomes]
rs35849127	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55816879	0.92[EUR][1000 genomes]
rs57095089	0.83[EUR][1000 genomes]
rs58509908	0.92[EUR][1000 genomes]
rs7136389	0.86[EUR][1000 genomes]
rs71452671	0.83[EUR][1000 genomes]
rs71452672	0.83[EUR][1000 genomes]
rs71452676	0.89[EUR][1000 genomes]
rs71452677	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7298004	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7309737	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7311415	0.92[EUR][1000 genomes]
rs7959432	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs7963971	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7974231	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv930978	chr12:118866332-119450600	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	esv2757516	chr12:119229694-119294323	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2759916	chr12:119229694-119294323	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv826525	chr12:119247463-119290732	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119252200-119255000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr12:119254600-119255000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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