Variant report

Variant rs73114498
Chromosome Location chr12:42629601-42629602
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42568800-42630600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr12:42569600-42630800 Weak transcription Colonic Mucosa Colon
3 chr12:42569800-42631000 Weak transcription Gastric stomach
4 chr12:42586800-42630000 Weak transcription Fetal Kidney kidney
5 chr12:42602400-42630800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr12:42607800-42630600 Weak transcription NHEK skin
7 chr12:42608200-42630600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr12:42609800-42631000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:42613600-42631000 Weak transcription Ovary ovary
10 chr12:42613800-42630800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr12:42620400-42630800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr12:42620400-42631000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr12:42620600-42630000 Weak transcription HMEC breast
14 chr12:42620600-42630200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:42620600-42630800 Weak transcription Fetal Intestine Small intestine
16 chr12:42620600-42630800 Weak transcription Fetal Stomach stomach
17 chr12:42627200-42630800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr12:42627800-42629800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr12:42628000-42631000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr12:42628200-42630600 Enhancers Primary T helper cells PMA-I stimulated --
21 chr12:42628200-42631000 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr12:42628400-42630600 Enhancers Liver Liver
23 chr12:42628600-42629800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr12:42628600-42629800 Enhancers Pancreas Pancrea
25 chr12:42628600-42629800 Enhancers Psoas Muscle Psoas
26 chr12:42628600-42629800 Enhancers Spleen Spleen
27 chr12:42628600-42630000 Enhancers Adipose Nuclei Adipose
28 chr12:42628600-42630000 Enhancers Brain Angular Gyrus brain
29 chr12:42628600-42630000 Enhancers Brain Inferior Temporal Lobe brain
30 chr12:42628600-42630000 Enhancers NHDF-Ad bronchial
31 chr12:42628600-42630400 Enhancers Brain Cingulate Gyrus brain
32 chr12:42628600-42630800 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr12:42628600-42630800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr12:42628600-42630800 Enhancers Brain Substantia Nigra brain
35 chr12:42628600-42630800 Enhancers Fetal Heart heart
36 chr12:42628600-42631000 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr12:42628600-42631000 Weak transcription Esophagus oesophagus
38 chr12:42628600-42631200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr12:42628800-42630000 Enhancers HSMMtube muscle
40 chr12:42628800-42630200 Transcr. at gene 5' and 3' A549 lung
41 chr12:42628800-42630600 Enhancers Brain Hippocampus Middle brain
42 chr12:42628800-42630800 Enhancers HepG2 liver
43 chr12:42628800-42631000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr12:42629000-42629800 Enhancers Rectal Smooth Muscle rectum
45 chr12:42629000-42630000 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr12:42629000-42630000 Enhancers Rectal Mucosa Donor 31 rectum
47 chr12:42629000-42630000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
48 chr12:42629000-42630200 Enhancers Fetal Brain Male brain
49 chr12:42629000-42630800 Weak transcription Fetal Muscle Leg muscle
50 chr12:42629000-42631000 Enhancers Colon Smooth Muscle Colon

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