The 2.0 version of rSNPBase

Variant report

Variant rs73127421
Chromosome Location chr12:42552459-42552460
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42539200-42563800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr12:42539400-42554000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr12:42539400-42554200 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr12:42539400-42556000 Weak transcription Muscle Satellite Cultured Cells --
5 chr12:42539400-42577000 Weak transcription Aorta Aorta
6 chr12:42539400-42583200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr12:42539600-42553600 Weak transcription Adipose Nuclei Adipose
8 chr12:42539600-42553800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr12:42539600-42553800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr12:42539600-42555800 Weak transcription Brain Substantia Nigra brain
11 chr12:42539600-42556200 Weak transcription HSMMtube muscle
12 chr12:42539600-42574000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:42539600-42578400 Weak transcription Left Ventricle heart
14 chr12:42539600-42586000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr12:42539800-42553000 Weak transcription Hela-S3 cervix
16 chr12:42539800-42554200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr12:42539800-42568600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr12:42539800-42569000 Weak transcription Fetal Kidney kidney
19 chr12:42539800-42582800 Weak transcription Spleen Spleen
20 chr12:42539800-42607800 Weak transcription Pancreas Pancrea
21 chr12:42540000-42553800 Weak transcription Primary B cells from peripheral blood blood
22 chr12:42540000-42556000 Weak transcription Fetal Intestine Small intestine
23 chr12:42540000-42574800 Weak transcription Brain Anterior Caudate brain
24 chr12:42541200-42553600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr12:42545200-42553800 Weak transcription Primary T cells fromperipheralblood blood
26 chr12:42545400-42554200 Weak transcription Primary hematopoietic stem cells blood
27 chr12:42545600-42553200 Weak transcription NH-A brain
28 chr12:42546000-42564400 Weak transcription Fetal Muscle Trunk muscle
29 chr12:42546400-42553800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr12:42546600-42553800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:42547200-42553000 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr12:42547200-42563800 Weak transcription Fetal Stomach stomach
33 chr12:42547600-42554000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr12:42547800-42610400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr12:42548200-42553800 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr12:42548400-42553000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr12:42548400-42553800 Weak transcription Osteobl bone
38 chr12:42549200-42553600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr12:42549400-42575000 Weak transcription Brain Angular Gyrus brain
40 chr12:42549800-42553400 Weak transcription HepG2 liver
41 chr12:42550200-42553800 Weak transcription Liver Liver
42 chr12:42550200-42555400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:42550400-42553400 Weak transcription NHDF-Ad bronchial
44 chr12:42550400-42556200 Weak transcription Fetal Heart heart
45 chr12:42550600-42554200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr12:42550600-42554200 Weak transcription Fetal Intestine Large intestine
47 chr12:42550600-42555200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr12:42550600-42557400 Weak transcription Colonic Mucosa Colon
49 chr12:42550600-42615800 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr12:42550800-42553800 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015