Variant report

Variant	rs73126674
Chromosome Location	chr4:26431988-26431989
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11941651	1.00[AMR][1000 genomes]
rs4443266	1.00[AMR][1000 genomes]
rs57056140	1.00[AMR][1000 genomes]
rs73109119	1.00[AMR][1000 genomes]
rs73121189	1.00[AFR][1000 genomes]
rs73126668	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73126670	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73126675	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv967942	chr4:26431948-26434832	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26375200-26439200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr4:26381600-26439800	Weak transcription	Spleen	Spleen
3	chr4:26387200-26436000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr4:26399800-26437200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:26404400-26436000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr4:26408000-26439000	Weak transcription	Hela-S3	cervix
7	chr4:26408400-26442000	Weak transcription	Aorta	Aorta
8	chr4:26408800-26432200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr4:26413800-26440200	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr4:26414200-26432200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr4:26414600-26443000	Weak transcription	Fetal Brain Male	brain
12	chr4:26417200-26443600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr4:26420200-26440600	Strong transcription	Primary monocytes fromperipheralblood	blood
14	chr4:26421000-26432200	Weak transcription	Fetal Intestine Small	intestine
15	chr4:26421600-26434400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr4:26422000-26436200	Strong transcription	Primary T helper cells PMA-I stimulated	--
17	chr4:26422200-26433600	Strong transcription	Primary B cells from peripheral blood	blood
18	chr4:26422200-26434800	Strong transcription	Primary B cells from cord blood	blood
19	chr4:26422200-26436600	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr4:26422200-26437200	Strong transcription	Adipose Nuclei	Adipose
21	chr4:26422200-26440800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr4:26422200-26440800	Strong transcription	Primary neutrophils fromperipheralblood	blood
23	chr4:26422800-26433600	Strong transcription	HSMM	muscle
24	chr4:26422800-26441200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr4:26423000-26442600	Weak transcription	Fetal Heart	heart
26	chr4:26423200-26433000	Strong transcription	NHDF-Ad	bronchial
27	chr4:26423200-26446000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr4:26423400-26459200	Weak transcription	Thymus	Thymus
29	chr4:26424400-26440800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr4:26425000-26438400	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr4:26425200-26433200	Strong transcription	Muscle Satellite Cultured Cells	--
32	chr4:26425200-26441800	Strong transcription	HUES6 Cell Line	embryonic stem cell
33	chr4:26425600-26442600	Weak transcription	Stomach Mucosa	stomach
34	chr4:26425800-26433600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
35	chr4:26425800-26435800	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr4:26425800-26436200	Weak transcription	Colonic Mucosa	Colon
37	chr4:26425800-26438400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
38	chr4:26425800-26440200	Strong transcription	Placenta	Placenta
39	chr4:26426000-26435000	Strong transcription	Fetal Intestine Large	intestine
40	chr4:26426000-26436200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
41	chr4:26426200-26435000	Strong transcription	Rectal Mucosa Donor 29	rectum
42	chr4:26426200-26440600	Strong transcription	HUES48 Cell Line	embryonic stem cell
43	chr4:26426400-26433200	Strong transcription	Osteobl	bone
44	chr4:26427200-26432000	Weak transcription	Rectal Smooth Muscle	rectum
45	chr4:26427200-26440000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr4:26427400-26432200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr4:26427400-26432400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr4:26427600-26432000	Weak transcription	Brain Angular Gyrus	brain
49	chr4:26427800-26432200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
50	chr4:26428600-26440600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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