Variant report

Variant	rs73126675
Chromosome Location	chr4:26434482-26434483
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11941651	1.00[AMR][1000 genomes]
rs4443266	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57056140	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73109119	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73126668	1.00[AMR][1000 genomes]
rs73126670	1.00[AMR][1000 genomes]
rs73126674	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv967942	chr4:26431948-26434832	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26375200-26439200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr4:26381600-26439800	Weak transcription	Spleen	Spleen
3	chr4:26387200-26436000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr4:26399800-26437200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:26404400-26436000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr4:26408000-26439000	Weak transcription	Hela-S3	cervix
7	chr4:26408400-26442000	Weak transcription	Aorta	Aorta
8	chr4:26413800-26440200	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr4:26414600-26443000	Weak transcription	Fetal Brain Male	brain
10	chr4:26417200-26443600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr4:26420200-26440600	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr4:26422000-26436200	Strong transcription	Primary T helper cells PMA-I stimulated	--
13	chr4:26422200-26434800	Strong transcription	Primary B cells from cord blood	blood
14	chr4:26422200-26436600	Strong transcription	Primary T helper cells fromperipheralblood	blood
15	chr4:26422200-26437200	Strong transcription	Adipose Nuclei	Adipose
16	chr4:26422200-26440800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr4:26422200-26440800	Strong transcription	Primary neutrophils fromperipheralblood	blood
18	chr4:26422800-26441200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr4:26423000-26442600	Weak transcription	Fetal Heart	heart
20	chr4:26423200-26446000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr4:26423400-26459200	Weak transcription	Thymus	Thymus
22	chr4:26424400-26440800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr4:26425000-26438400	Strong transcription	HUES64 Cell Line	embryonic stem cell
24	chr4:26425200-26441800	Strong transcription	HUES6 Cell Line	embryonic stem cell
25	chr4:26425600-26442600	Weak transcription	Stomach Mucosa	stomach
26	chr4:26425800-26435800	Weak transcription	Pancreatic Islets	Pancreatic Islet
27	chr4:26425800-26436200	Weak transcription	Colonic Mucosa	Colon
28	chr4:26425800-26438400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
29	chr4:26425800-26440200	Strong transcription	Placenta	Placenta
30	chr4:26426000-26435000	Strong transcription	Fetal Intestine Large	intestine
31	chr4:26426000-26436200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
32	chr4:26426200-26435000	Strong transcription	Rectal Mucosa Donor 29	rectum
33	chr4:26426200-26440600	Strong transcription	HUES48 Cell Line	embryonic stem cell
34	chr4:26427200-26440000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr4:26428600-26440600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr4:26428800-26442600	Weak transcription	Pancreas	Pancrea
37	chr4:26429000-26442800	Weak transcription	Psoas Muscle	Psoas
38	chr4:26429800-26436200	Strong transcription	H1 Cell Line	embryonic stem cell
39	chr4:26430200-26436600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr4:26430400-26435000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr4:26430400-26435600	Strong transcription	Cortex derived primary cultured neurospheres	brain
42	chr4:26430400-26435600	Strong transcription	Liver	Liver
43	chr4:26430600-26434800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr4:26430600-26435000	Strong transcription	Primary T cells fromperipheralblood	blood
45	chr4:26430600-26435000	Strong transcription	Duodenum Mucosa	Duodenum
46	chr4:26430800-26434800	Strong transcription	Left Ventricle	heart
47	chr4:26430800-26435000	Strong transcription	Primary T cells from cord blood	blood
48	chr4:26430800-26435000	Strong transcription	Fetal Muscle Leg	muscle
49	chr4:26430800-26435600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
50	chr4:26430800-26436200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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