The 2.0 version of rSNPBase

Variant report

Variant rs73128429
Chromosome Location chr1:224426732-224426733
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224401800-224427600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:224401800-224475400 Weak transcription Esophagus oesophagus
3 chr1:224407600-224434000 Weak transcription Fetal Brain Male brain
4 chr1:224411600-224438000 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:224411600-224454400 Weak transcription Psoas Muscle Psoas
6 chr1:224412000-224433000 Weak transcription Fetal Heart heart
7 chr1:224412400-224473600 Weak transcription HepG2 liver
8 chr1:224413200-224432600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:224413800-224428000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:224413800-224428200 Strong transcription Fetal Muscle Trunk muscle
11 chr1:224414000-224432200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:224414200-224427800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:224414200-224427800 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:224414200-224428800 Strong transcription Fetal Intestine Large intestine
15 chr1:224414200-224438000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:224414400-224428800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:224415000-224436200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:224415000-224440000 Weak transcription Fetal Kidney kidney
19 chr1:224415600-224432600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:224415600-224435000 Weak transcription Gastric stomach
21 chr1:224415800-224435600 Weak transcription NHLF lung
22 chr1:224415800-224435800 Weak transcription Brain Angular Gyrus brain
23 chr1:224416000-224432800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr1:224416000-224436600 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:224416000-224465600 Weak transcription Small Intestine intestine
26 chr1:224416200-224433000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:224417200-224427600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:224417200-224427600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:224417400-224427600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:224417400-224427800 Strong transcription Primary T cells from cord blood blood
31 chr1:224417400-224427800 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr1:224417600-224426800 Strong transcription Primary T cells fromperipheralblood blood
33 chr1:224417800-224435600 Weak transcription Colonic Mucosa Colon
34 chr1:224418000-224435400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:224418000-224436600 Weak transcription Right Ventricle heart
36 chr1:224418400-224439400 Weak transcription HSMMtube muscle
37 chr1:224419200-224432600 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr1:224419200-224435600 Weak transcription Brain Anterior Caudate brain
39 chr1:224419200-224436600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:224419400-224427200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr1:224420400-224427800 Strong transcription Fetal Muscle Leg muscle
42 chr1:224420400-224435600 Weak transcription HMEC breast
43 chr1:224420800-224434400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:224421400-224433200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:224422200-224427800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:224422800-224427600 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr1:224422800-224427800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr1:224422800-224431000 Weak transcription Hela-S3 cervix
49 chr1:224423000-224427000 Enhancers H1 Cell Line embryonic stem cell
50 chr1:224423000-224427600 Strong transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015