The 2.0 version of rSNPBase

Variant report

Variant rs7313171
Chromosome Location chr12:4928871-4928872
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:4925200-4932000 Enhancers Primary B cells from peripheral blood blood
2 chr12:4925600-4934600 Enhancers Primary B cells from cord blood blood
3 chr12:4926000-4929800 Enhancers Fetal Thymus thymus
4 chr12:4926000-4930000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr12:4926400-4939000 Weak transcription Spleen Spleen
6 chr12:4926600-4929000 Enhancers Brain Substantia Nigra brain
7 chr12:4927400-4929200 Enhancers Primary T cells from cord blood blood
8 chr12:4927400-4929400 Enhancers Brain Angular Gyrus brain
9 chr12:4927400-4929800 Weak transcription Fetal Stomach stomach
10 chr12:4927400-4934400 Weak transcription Stomach Smooth Muscle stomach
11 chr12:4927400-4935400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr12:4927600-4929800 Weak transcription Fetal Muscle Leg muscle
13 chr12:4927600-4930800 Enhancers Fetal Brain Male brain
14 chr12:4927800-4929000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr12:4927800-4929000 Enhancers Brain Cingulate Gyrus brain
16 chr12:4927800-4933200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr12:4927800-4933200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr12:4927800-4938800 Weak transcription Brain Germinal Matrix brain
19 chr12:4928000-4929000 Enhancers Fetal Brain Female brain
20 chr12:4928000-4929200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr12:4928000-4935800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr12:4928200-4929200 Enhancers Brain Inferior Temporal Lobe brain
23 chr12:4928200-4930400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:4928200-4932400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr12:4928200-4933400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr12:4928400-4929000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr12:4928400-4929600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr12:4928400-4929800 Enhancers GM12878-XiMat blood
29 chr12:4928400-4931400 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr12:4928400-4932000 Enhancers Primary hematopoietic stem cells blood
31 chr12:4928400-4933200 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr12:4928600-4929000 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr12:4928600-4929000 Enhancers Adipose Nuclei Adipose
34 chr12:4928600-4929000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
35 chr12:4928600-4929200 Enhancers Thymus Thymus
36 chr12:4928600-4929400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr12:4928600-4929400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr12:4928600-4929400 Enhancers Monocytes-CD14+_RO01746 blood
39 chr12:4928600-4930200 Weak transcription Right Atrium heart
40 chr12:4928600-4930600 Enhancers Primary monocytes fromperipheralblood blood
41 chr12:4928600-4931000 Enhancers Rectal Smooth Muscle rectum
42 chr12:4928600-4931600 Enhancers Colon Smooth Muscle Colon
43 chr12:4928800-4929000 Enhancers Brain Hippocampus Middle brain
44 chr12:4928800-4929200 Enhancers Placenta Placenta
45 chr12:4928800-4930000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr12:4928800-4930600 Enhancers Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015