Variant report

Variant	rs73140581
Chromosome Location	chr7:66633428-66633429
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 178 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:161)

rs_ID	r²[population]
rs10081302	0.82[ASN][1000 genomes]
rs10081331	0.81[ASN][1000 genomes]
rs10081381	0.81[ASN][1000 genomes]
rs10155890	0.85[ASN][1000 genomes]
rs10155918	0.91[ASN][1000 genomes]
rs10155972	0.91[ASN][1000 genomes]
rs10155983	0.88[ASN][1000 genomes]
rs10156209	0.93[ASN][1000 genomes]
rs10231586	0.88[ASN][1000 genomes]
rs10234493	0.82[ASN][1000 genomes]
rs10235588	0.93[ASN][1000 genomes]
rs10243013	0.82[ASN][1000 genomes]
rs10243217	0.93[ASN][1000 genomes]
rs10243421	0.82[ASN][1000 genomes]
rs10246747	0.88[ASN][1000 genomes]
rs10250113	0.91[ASN][1000 genomes]
rs10250487	0.93[ASN][1000 genomes]
rs10251763	0.95[ASN][1000 genomes]
rs10252143	0.95[ASN][1000 genomes]
rs10253339	0.88[ASN][1000 genomes]
rs10254788	0.82[ASN][1000 genomes]
rs10256139	0.95[ASN][1000 genomes]
rs10257949	0.95[ASN][1000 genomes]
rs10262150	0.98[ASN][1000 genomes]
rs10262781	0.87[ASN][1000 genomes]
rs10267300	0.95[ASN][1000 genomes]
rs10270292	0.86[ASN][1000 genomes]
rs10272347	0.95[ASN][1000 genomes]
rs10272591	0.95[ASN][1000 genomes]
rs10274305	0.82[ASN][1000 genomes]
rs10280699	0.89[ASN][1000 genomes]
rs10950063	0.83[EUR][1000 genomes]
rs11495955	0.89[AFR][1000 genomes]
rs11760347	0.89[ASN][1000 genomes]
rs11761100	0.89[ASN][1000 genomes]
rs11764376	0.91[ASN][1000 genomes]
rs11765001	0.89[AFR][1000 genomes]
rs11767172	0.83[EUR][1000 genomes]
rs11768286	0.89[AFR][1000 genomes]
rs11770086	0.84[ASN][1000 genomes]
rs11771408	0.80[ASN][1000 genomes]
rs11772455	0.91[ASN][1000 genomes]
rs11773012	0.86[ASN][1000 genomes]
rs11773274	0.91[ASN][1000 genomes]
rs11773730	0.91[ASN][1000 genomes]
rs12154409	0.89[ASN][1000 genomes]
rs12154419	0.91[ASN][1000 genomes]
rs12155044	0.93[ASN][1000 genomes]
rs12155051	0.95[ASN][1000 genomes]
rs13225639	0.87[ASN][1000 genomes]
rs13229085	0.87[ASN][1000 genomes]
rs13233281	0.89[AFR][1000 genomes]
rs13244997	0.82[ASN][1000 genomes]
rs17139656	0.89[ASN][1000 genomes]
rs1815098	0.86[ASN][1000 genomes]
rs1815100	0.81[ASN][1000 genomes]
rs1829931	0.81[ASN][1000 genomes]
rs1880278	0.87[ASN][1000 genomes]
rs1965480	0.86[ASN][1000 genomes]
rs2421398	0.82[ASN][1000 genomes]
rs2421404	0.91[ASN][1000 genomes]
rs2421405	0.89[ASN][1000 genomes]
rs2421419	0.93[ASN][1000 genomes]
rs2690170	0.81[ASN][1000 genomes]
rs28366417	0.95[ASN][1000 genomes]
rs2844157	0.91[ASN][1000 genomes]
rs2844170	0.81[ASN][1000 genomes]
rs28534521	0.95[ASN][1000 genomes]
rs28620117	0.87[ASN][1000 genomes]
rs28651697	0.86[ASN][1000 genomes]
rs28715521	0.93[ASN][1000 genomes]
rs28888421	0.84[ASN][1000 genomes]
rs2901424	0.82[ASN][1000 genomes]
rs2901425	0.87[ASN][1000 genomes]
rs3015884	0.91[ASN][1000 genomes]
rs3107871	0.84[ASN][1000 genomes]
rs34145691	0.95[ASN][1000 genomes]
rs34146912	0.82[ASN][1000 genomes]
rs34176733	0.82[ASN][1000 genomes]
rs34317556	0.89[ASN][1000 genomes]
rs34344363	0.86[ASN][1000 genomes]
rs34654147	0.95[ASN][1000 genomes]
rs35042775	0.88[ASN][1000 genomes]
rs35048638	0.95[ASN][1000 genomes]
rs35120837	0.82[ASN][1000 genomes]
rs35290283	0.82[ASN][1000 genomes]
rs35470341	0.87[ASN][1000 genomes]
rs35723315	0.82[ASN][1000 genomes]
rs35982871	0.82[ASN][1000 genomes]
rs36108108	0.95[ASN][1000 genomes]
rs3962076	0.95[ASN][1000 genomes]
rs3980767	0.95[ASN][1000 genomes]
rs3980775	0.91[ASN][1000 genomes]
rs3980776	0.93[ASN][1000 genomes]
rs3980778	0.84[ASN][1000 genomes]
rs3980790	0.82[ASN][1000 genomes]
rs4083135	0.87[ASN][1000 genomes]
rs4101640	0.95[ASN][1000 genomes]
rs4145350	0.91[ASN][1000 genomes]
rs4295533	0.93[ASN][1000 genomes]
rs4382353	0.86[ASN][1000 genomes]
rs4433024	0.82[ASN][1000 genomes]
rs4551224	0.95[ASN][1000 genomes]
rs4552791	0.91[ASN][1000 genomes]
rs4618581	0.95[ASN][1000 genomes]
rs4621684	0.95[ASN][1000 genomes]
rs4717353	0.95[ASN][1000 genomes]
rs4718463	0.95[ASN][1000 genomes]
rs4718464	0.91[ASN][1000 genomes]
rs4718469	0.88[ASN][1000 genomes]
rs4718470	0.98[ASN][1000 genomes]
rs4718471	0.98[ASN][1000 genomes]
rs4718501	0.80[ASN][1000 genomes]
rs55756354	0.86[ASN][1000 genomes]
rs55921608	0.80[ASN][1000 genomes]
rs56001319	0.82[ASN][1000 genomes]
rs61061833	0.84[ASN][1000 genomes]
rs6460330	0.80[ASN][1000 genomes]
rs67855845	0.95[ASN][1000 genomes]
rs6952309	0.87[ASN][1000 genomes]
rs6966142	0.87[ASN][1000 genomes]
rs6972762	0.82[ASN][1000 genomes]
rs6972777	0.82[ASN][1000 genomes]
rs6978789	0.81[ASN][1000 genomes]
rs6978918	0.80[ASN][1000 genomes]
rs71535637	0.91[ASN][1000 genomes]
rs71535638	0.93[ASN][1000 genomes]
rs73134271	0.89[AFR][1000 genomes]
rs73134299	0.89[AFR][1000 genomes]
rs73136205	0.89[AFR][1000 genomes]
rs73140561	0.89[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs73140602	0.95[ASN][1000 genomes]
rs73142604	0.95[ASN][1000 genomes]
rs7350002	0.82[ASN][1000 genomes]
rs7350057	0.82[ASN][1000 genomes]
rs7779596	0.81[ASN][1000 genomes]
rs7780700	0.91[ASN][1000 genomes]
rs7781804	0.91[ASN][1000 genomes]
rs7783513	0.82[ASN][1000 genomes]
rs7791642	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7792212	0.84[ASN][1000 genomes]
rs7793101	0.84[ASN][1000 genomes]
rs7793104	0.82[ASN][1000 genomes]
rs7796133	0.84[ASN][1000 genomes]
rs7804802	0.82[ASN][1000 genomes]
rs9654771	0.95[ASN][1000 genomes]
rs9654851	0.93[ASN][1000 genomes]
rs9654853	0.95[ASN][1000 genomes]
rs9654854	0.95[ASN][1000 genomes]
rs9690120	0.87[ASN][1000 genomes]
rs9690121	0.87[ASN][1000 genomes]
rs9690145	0.87[ASN][1000 genomes]
rs9690839	0.82[ASN][1000 genomes]
rs9692192	0.82[ASN][1000 genomes]
rs9692303	0.87[ASN][1000 genomes]
rs9886204	0.82[ASN][1000 genomes]
rs9886206	0.82[ASN][1000 genomes]
rs9886263	0.82[ASN][1000 genomes]
rs9886290	0.82[ASN][1000 genomes]
rs9886306	0.82[ASN][1000 genomes]
rs9886326	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758118	chr7:66401430-66859253	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	esv2759535	chr7:66401430-66859253	Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
3	nsv888330	chr7:66502171-66877880	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
4	nsv831019	chr7:66516808-66720485	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	9 gene(s)	inside rSNPs	diseases
5	esv1802655	chr7:66576034-66634666	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
6	esv1816643	chr7:66576034-66634666	Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
7	esv1840497	chr7:66576034-66634666	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
8	esv1851064	chr7:66576034-66634666	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
9	esv1832033	chr7:66601324-66637001	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
10	esv1822512	chr7:66613751-66637001	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
11	esv1826252	chr7:66613751-66637001	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases
12	esv1810114	chr7:66621964-66636410	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	n/a	n/a	inside rSNPs	diseases
13	esv2422035	chr7:66621964-66676630	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
14	esv1800770	chr7:66629329-66645232	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv1831418	chr7:66629329-66645232	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv1831706	chr7:66629329-66645232	Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv441983	chr7:66629329-66645232	Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66621600-66672000	Weak transcription	Fetal Intestine Large	intestine
2	chr7:66628600-66684600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr7:66629000-66650200	Weak transcription	Fetal Thymus	thymus

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