Variant report

Variant rs73141435
Chromosome Location chr4:53887255-53887256
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53878400-53888000 Weak transcription Right Atrium heart
2 chr4:53879400-53887800 Weak transcription Fetal Heart heart
3 chr4:53879400-53888400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr4:53879400-53889600 Weak transcription Aorta Aorta
5 chr4:53879600-53887600 Weak transcription Colon Smooth Muscle Colon
6 chr4:53879800-53888600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr4:53879800-53890000 Weak transcription GM12878-XiMat blood
8 chr4:53880400-53891800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr4:53880600-53888000 Weak transcription Rectal Smooth Muscle rectum
10 chr4:53880800-53892800 Weak transcription Primary T cells from cord blood blood
11 chr4:53882600-53888200 Weak transcription Fetal Stomach stomach
12 chr4:53883200-53896400 Weak transcription Primary B cells from cord blood blood
13 chr4:53884400-53889600 Enhancers Ovary ovary
14 chr4:53885200-53887400 Enhancers Osteobl bone
15 chr4:53885200-53887800 Weak transcription Fetal Kidney kidney
16 chr4:53885600-53887400 Enhancers HSMMtube muscle
17 chr4:53885600-53888800 Enhancers NHDF-Ad bronchial
18 chr4:53886000-53888800 Enhancers NHLF lung
19 chr4:53886200-53891200 Enhancers Psoas Muscle Psoas
20 chr4:53886200-53892400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr4:53886400-53889200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr4:53886400-53892400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr4:53886600-53887400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:53886600-53887400 Enhancers A549 lung
25 chr4:53886600-53888000 Weak transcription Fetal Lung lung
26 chr4:53886600-53889400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:53886800-53887400 Enhancers Liver Liver
28 chr4:53886800-53887400 Enhancers Left Ventricle heart
29 chr4:53886800-53887400 Enhancers HepG2 liver
30 chr4:53886800-53888000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr4:53886800-53890000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:53886800-53890200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:53887000-53888000 Weak transcription Adipose Nuclei Adipose
34 chr4:53887000-53888000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr4:53887000-53888000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr4:53887000-53888000 Weak transcription Small Intestine intestine
37 chr4:53887000-53888200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr4:53887000-53888800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr4:53887000-53889000 Weak transcription Pancreas Pancrea
40 chr4:53887000-53892400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr4:53887200-53888000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr4:53887200-53892400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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