The 2.0 version of rSNPBase

Variant report

Variant rs73143445
Chromosome Location chr4:54016069-54016070
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53987800-54016800 Weak transcription NHLF lung
2 chr4:53993800-54027800 Weak transcription Fetal Stomach stomach
3 chr4:53995400-54017800 Weak transcription Brain Substantia Nigra brain
4 chr4:53997000-54017600 Weak transcription Gastric stomach
5 chr4:53997400-54020000 Weak transcription HSMM muscle
6 chr4:53999000-54017200 Weak transcription Fetal Lung lung
7 chr4:53999000-54027800 Weak transcription NHDF-Ad bronchial
8 chr4:54001200-54017600 Weak transcription Spleen Spleen
9 chr4:54003400-54019000 Weak transcription GM12878-XiMat blood
10 chr4:54004000-54017600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr4:54004200-54020800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr4:54004200-54052200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:54005600-54023600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr4:54007000-54017600 Weak transcription Right Ventricle heart
15 chr4:54007200-54030600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr4:54008200-54017200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr4:54008200-54017600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr4:54008600-54019000 Weak transcription Fetal Intestine Small intestine
19 chr4:54008800-54017400 Weak transcription Colon Smooth Muscle Colon
20 chr4:54009200-54017200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr4:54009400-54016400 Weak transcription Placenta Placenta
22 chr4:54009400-54017400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr4:54009600-54017200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr4:54009600-54017600 Weak transcription Rectal Smooth Muscle rectum
25 chr4:54009600-54017600 Weak transcription Stomach Smooth Muscle stomach
26 chr4:54009600-54024000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr4:54009800-54017800 Weak transcription Colonic Mucosa Colon
28 chr4:54010200-54034600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr4:54011400-54017600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr4:54011400-54027800 Weak transcription Aorta Aorta
31 chr4:54011600-54016200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr4:54011600-54017200 Weak transcription Primary B cells from peripheral blood blood
33 chr4:54011600-54017200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:54011600-54017200 Weak transcription Dnd41 blood
35 chr4:54011600-54017400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr4:54011600-54017400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr4:54011600-54017600 Weak transcription Brain Cingulate Gyrus brain
38 chr4:54011600-54017600 Weak transcription Duodenum Mucosa Duodenum
39 chr4:54011600-54019000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr4:54011600-54019000 Weak transcription Lung lung
41 chr4:54011600-54021000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:54011600-54021000 Weak transcription Primary B cells from cord blood blood
43 chr4:54011600-54021400 Weak transcription Primary hematopoietic stem cells blood
44 chr4:54011600-54022600 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr4:54011600-54027200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr4:54011600-54027800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr4:54011600-54029200 Weak transcription Fetal Muscle Trunk muscle
48 chr4:54011600-54030600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr4:54011600-54052200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr4:54011800-54017200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015