Variant report

Variant	rs60129843
Chromosome Location	chr4:54239217-54239218
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:54224763..54227225-chr4:54237366..54239290,2	K562	blood:
2	chr4:54238373..54240909-chr4:54242022..54244053,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000145216	Chromatin interaction

rs_ID	r²[population]
rs11934255	1.00[EUR][1000 genomes]
rs17082480	1.00[AMR][1000 genomes]
rs17082514	1.00[EUR][1000 genomes]
rs17082527	1.00[EUR][1000 genomes]
rs17082568	1.00[EUR][1000 genomes]
rs17082586	1.00[EUR][1000 genomes]
rs17083057	1.00[AMR][1000 genomes]
rs28452451	1.00[AMR][1000 genomes]
rs28525154	1.00[AMR][1000 genomes]
rs56813620	1.00[AMR][1000 genomes]
rs57159957	1.00[EUR][1000 genomes]
rs57511626	1.00[AMR][1000 genomes]
rs59214826	1.00[AMR][1000 genomes]
rs60233651	1.00[AMR][1000 genomes]
rs60298480	1.00[EUR][1000 genomes]
rs60576071	1.00[AMR][1000 genomes]
rs60960188	1.00[EUR][1000 genomes]
rs73143445	1.00[EUR][1000 genomes]
rs73143452	1.00[AMR][1000 genomes]
rs73143453	1.00[AMR][1000 genomes]
rs73143454	1.00[EUR][1000 genomes]
rs73143457	1.00[AMR][1000 genomes]
rs73143465	1.00[AMR][1000 genomes]
rs73143467	1.00[AMR][1000 genomes]
rs73143469	1.00[EUR][1000 genomes]
rs73143473	1.00[EUR][1000 genomes]
rs73143475	1.00[AMR][1000 genomes]
rs73143476	1.00[AMR][1000 genomes]
rs73143478	1.00[EUR][1000 genomes]
rs73143480	1.00[AMR][1000 genomes]
rs73143483	1.00[AMR][1000 genomes]
rs73143487	1.00[AMR][1000 genomes]
rs73143488	1.00[AMR][1000 genomes]
rs73143491	1.00[AMR][1000 genomes]
rs73143494	1.00[AMR][1000 genomes]
rs73143496	1.00[AMR][1000 genomes]
rs73143501	1.00[EUR][1000 genomes]
rs73145365	1.00[EUR][1000 genomes]
rs73145375	1.00[EUR][1000 genomes]
rs73147304	1.00[EUR][1000 genomes]
rs73147392	1.00[AMR][1000 genomes]
rs73147395	1.00[EUR][1000 genomes]
rs73147399	1.00[EUR][1000 genomes]
rs73147402	1.00[EUR][1000 genomes]
rs73149204	1.00[AMR][1000 genomes]
rs73149226	1.00[EUR][1000 genomes]
rs73149233	1.00[EUR][1000 genomes]
rs73149238	1.00[EUR][1000 genomes]
rs73149250	1.00[EUR][1000 genomes]
rs73149260	1.00[EUR][1000 genomes]
rs73149274	1.00[EUR][1000 genomes]
rs73151252	1.00[EUR][1000 genomes]
rs7677921	1.00[AMR][1000 genomes]
rs7684049	1.00[AMR][1000 genomes]

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54233000-54243200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr4:54238600-54243000	Weak transcription	K562	blood
3	chr4:54239200-54242200	Weak transcription	Colonic Mucosa	Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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