The 2.0 version of rSNPBase

Variant report

Variant rs73149260
Chromosome Location chr4:54174689-54174690
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54140200-54179000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr4:54164400-54177400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr4:54168200-54188000 Weak transcription Left Ventricle heart
4 chr4:54169200-54180000 Weak transcription Brain Hippocampus Middle brain
5 chr4:54169200-54187800 Weak transcription Liver Liver
6 chr4:54169400-54178600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr4:54169400-54187400 Weak transcription Dnd41 blood
8 chr4:54169600-54187800 Weak transcription Brain Angular Gyrus brain
9 chr4:54169800-54181400 Weak transcription Fetal Lung lung
10 chr4:54169800-54181400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:54169800-54187800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr4:54169800-54216200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr4:54170000-54181400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr4:54170000-54183800 Weak transcription Primary B cells from peripheral blood blood
15 chr4:54170000-54186800 Weak transcription HSMM muscle
16 chr4:54170600-54187600 Weak transcription K562 blood
17 chr4:54170600-54230600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:54170800-54181400 Weak transcription Fetal Thymus thymus
19 chr4:54171200-54179200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr4:54171200-54188000 Weak transcription Esophagus oesophagus
21 chr4:54171600-54181200 Weak transcription Duodenum Mucosa Duodenum
22 chr4:54171600-54181400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr4:54171600-54181400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr4:54171600-54187600 Weak transcription Primary monocytes fromperipheralblood blood
25 chr4:54171800-54177600 Weak transcription Primary T cells fromperipheralblood blood
26 chr4:54171800-54181400 Weak transcription Brain Cingulate Gyrus brain
27 chr4:54172000-54176400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:54172000-54181200 Weak transcription Fetal Intestine Small intestine
29 chr4:54172000-54188000 Weak transcription Pancreas Pancrea
30 chr4:54172000-54188000 Weak transcription HepG2 liver
31 chr4:54172200-54180800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr4:54172200-54181800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr4:54172400-54175600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:54172600-54215400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr4:54173000-54174800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr4:54173000-54187600 Weak transcription Brain Anterior Caudate brain
37 chr4:54173200-54177800 Weak transcription Gastric stomach
38 chr4:54173200-54182000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr4:54173400-54175400 Enhancers Osteobl bone
40 chr4:54173400-54175800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr4:54173400-54176400 Enhancers Muscle Satellite Cultured Cells --
42 chr4:54173400-54181400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr4:54173400-54186800 Weak transcription NH-A brain
44 chr4:54173600-54182200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr4:54173800-54181800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr4:54174200-54175600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr4:54174200-54175600 Weak transcription NHLF lung
48 chr4:54174200-54177600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr4:54174200-54177600 Enhancers NHDF-Ad bronchial
50 chr4:54174200-54178200 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015