The 2.0 version of rSNPBase

Variant report

Variant rs73142125
Chromosome Location chr1:246700732-246700733
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246691200-246703000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:246691400-246702000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:246694400-246704000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:246694400-246704200 Weak transcription Left Ventricle heart
5 chr1:246694600-246706600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:246694800-246706600 Weak transcription Right Ventricle heart
7 chr1:246697400-246704200 Weak transcription Lung lung
8 chr1:246698000-246705000 Weak transcription Small Intestine intestine
9 chr1:246698200-246703600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:246698200-246705800 Weak transcription NHLF lung
11 chr1:246698800-246703000 Weak transcription Ovary ovary
12 chr1:246699000-246702200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:246699200-246701400 Weak transcription Primary B cells from cord blood blood
14 chr1:246699200-246702200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:246699200-246705800 Weak transcription HUVEC blood vessel
16 chr1:246699400-246701800 Weak transcription Liver Liver
17 chr1:246699400-246702000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:246699400-246706200 Weak transcription Spleen Spleen
19 chr1:246699600-246701600 Weak transcription Fetal Muscle Leg muscle
20 chr1:246699600-246702000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:246699600-246702200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:246699600-246703200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:246699600-246704200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:246699600-246704200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:246699800-246702000 Weak transcription Primary T cells from cord blood blood
26 chr1:246699800-246702200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:246699800-246703200 Weak transcription Primary B cells from peripheral blood blood
28 chr1:246699800-246703800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr1:246699800-246704000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:246699800-246704200 Weak transcription GM12878-XiMat blood
31 chr1:246699800-246704600 Weak transcription Aorta Aorta
32 chr1:246699800-246705200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:246699800-246705200 Weak transcription NHDF-Ad bronchial
34 chr1:246700000-246702000 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:246700000-246702000 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:246700000-246702800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:246700000-246704200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:246700000-246705600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:246700200-246702000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:246700200-246702000 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:246700200-246702200 Weak transcription Adipose Nuclei Adipose
42 chr1:246700200-246702200 Weak transcription Fetal Intestine Small intestine
43 chr1:246700200-246702200 Weak transcription Fetal Stomach stomach
44 chr1:246700200-246702400 Weak transcription Brain Hippocampus Middle brain
45 chr1:246700200-246703000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:246700200-246703800 Weak transcription Primary hematopoietic stem cells blood
47 chr1:246700200-246706400 Weak transcription Rectal Smooth Muscle rectum
48 chr1:246700400-246701800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:246700400-246702200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:246700400-246702200 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015