Variant report
| Variant | rs7314731 |
|---|---|
| Chromosome Location | chr12:10259118-10259119 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs11053583 | 0.94[AFR][1000 genomes] |
| rs11053584 | 0.94[AFR][1000 genomes] |
| rs11053585 | 0.94[AFR][1000 genomes] |
| rs12299013 | 0.94[AFR][1000 genomes] |
| rs12300411 | 0.94[AFR][1000 genomes] |
| rs12305864 | 0.96[AFR][1000 genomes] |
| rs2087308 | 0.94[AFR][1000 genomes] |
| rs2101466 | 0.94[AFR][1000 genomes] |
| rs55909700 | 0.96[AFR][1000 genomes] |
| rs56054444 | 0.96[AFR][1000 genomes] |
| rs56915317 | 0.92[AFR][1000 genomes] |
| rs58747130 | 0.94[AFR][1000 genomes] |
| rs60168092 | 0.93[AFR][1000 genomes] |
| rs60752837 | 0.94[AFR][1000 genomes] |
| rs61316374 | 0.92[AFR][1000 genomes] |
| rs61704402 | 0.94[AFR][1000 genomes] |
| rs6488260 | 0.94[AFR][1000 genomes] |
| rs7294944 | 0.94[AFR][1000 genomes] |
| rs7301063 | 0.94[AFR][1000 genomes] |
| rs7301313 | 0.94[AFR][1000 genomes] |
| rs7301474 | 0.94[AFR][1000 genomes] |
| rs7304980 | 0.94[AFR][1000 genomes] |
| rs7305987 | 0.95[AFR][1000 genomes] |
| rs7306132 | 0.93[AFR][1000 genomes] |
| rs7306138 | 0.94[AFR][1000 genomes] |
| rs7962985 | 0.94[AFR][1000 genomes] |
| rs7970226 | 0.94[AFR][1000 genomes] |
| rs7976707 | 0.94[AFR][1000 genomes] |
| rs7979911 | 0.94[AFR][1000 genomes] |
| rs9651848 | 0.94[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv898757 | chr12:10229281-10614641 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 48 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:10255800-10264200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
