Variant report

Variant	rs73152520
Chromosome Location	chr7:137413492-137413493
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12536204	1.00[AFR][1000 genomes]
rs1364396	0.80[ASN][1000 genomes]
rs2882782	1.00[AFR][1000 genomes]
rs61757580	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73152519	1.00[EUR][1000 genomes]
rs73152521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137403200-137416200	Weak transcription	HSMMtube	muscle
2	chr7:137403400-137416000	Weak transcription	HSMM	muscle
3	chr7:137403800-137415800	Weak transcription	Osteobl	bone
4	chr7:137408200-137415800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr7:137409600-137414200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr7:137411000-137424800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr7:137412800-137413600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr7:137413000-137413600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr7:137413000-137413600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr7:137413400-137415400	Weak transcription	NHDF-Ad	bronchial
11	chr7:137413400-137432200	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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