Variant report

Variant	rs73171424
Chromosome Location	chr8:2167772-2167773
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:2088788..2090434-chr8:2167182..2168979,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11774799	1.00[AFR][1000 genomes]
rs13252711	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7834227	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2164600-2184400	Weak transcription	Spleen	Spleen
2	chr8:2164800-2172000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:2165000-2170000	Weak transcription	Fetal Brain Male	brain
4	chr8:2166400-2168000	Enhancers	Primary T cells fromperipheralblood	blood
5	chr8:2166400-2168000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr8:2166400-2168200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr8:2166600-2168800	Enhancers	Primary T cells from cord blood	blood
8	chr8:2166800-2167800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr8:2166800-2167800	Flanking Active TSS	Dnd41	blood
10	chr8:2166800-2168000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr8:2166800-2168000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
12	chr8:2166800-2168000	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr8:2166800-2168200	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr8:2166800-2168200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr8:2167000-2168800	Enhancers	Primary B cells from peripheral blood	blood
16	chr8:2167200-2167800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr8:2167200-2167800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr8:2167200-2168000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr8:2167200-2168200	Enhancers	Primary B cells from cord blood	blood
20	chr8:2167400-2167800	Enhancers	Primary hematopoietic stem cells	blood
21	chr8:2167400-2167800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr8:2167400-2167800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
23	chr8:2167600-2168200	Enhancers	Primary T helper cells fromperipheralblood	blood
24	chr8:2167600-2168800	Enhancers	Fetal Thymus	thymus

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