Variant report

Variant	rs7834227
Chromosome Location	chr8:2163923-2163924
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11774799	1.00[AFR][1000 genomes]
rs13252711	1.00[AFR][1000 genomes]
rs73171424	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2151600-2166800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr8:2151800-2166800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr8:2160800-2164200	Weak transcription	Psoas Muscle	Psoas
4	chr8:2161800-2164800	Enhancers	Fetal Thymus	thymus
5	chr8:2162600-2164800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
6	chr8:2163000-2164600	Enhancers	Fetal Lung	lung
7	chr8:2163000-2166400	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr8:2163000-2166800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr8:2163200-2164000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr8:2163200-2166600	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr8:2163200-2166800	Weak transcription	Primary hematopoietic stem cells	blood
12	chr8:2163200-2166800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr8:2163400-2164600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr8:2163600-2164000	Enhancers	Dnd41	blood
15	chr8:2163600-2166400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr8:2163600-2166600	Weak transcription	Primary T cells from cord blood	blood
17	chr8:2163800-2164400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr8:2163800-2164600	Bivalent Enhancer	Left Ventricle	heart
19	chr8:2163800-2164800	Bivalent Enhancer	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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