Variant report

Variant	rs73177760
Chromosome Location	chr3:94539693-94539694
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11914374	0.98[EUR][1000 genomes]
rs300077	0.83[EUR][1000 genomes]
rs66524820	0.98[EUR][1000 genomes]
rs6780760	0.81[EUR][1000 genomes]
rs6804802	0.81[EUR][1000 genomes]
rs73177754	0.95[EUR][1000 genomes]
rs73179414	0.91[EUR][1000 genomes]
rs73179420	0.83[EUR][1000 genomes]
rs73179422	0.81[EUR][1000 genomes]
rs73179424	0.83[EUR][1000 genomes]
rs73179452	0.85[EUR][1000 genomes]
rs73179462	0.83[EUR][1000 genomes]
rs73179464	0.83[EUR][1000 genomes]
rs73179478	0.81[EUR][1000 genomes]
rs73847061	0.83[EUR][1000 genomes]
rs7635954	0.83[EUR][1000 genomes]
rs7649622	0.98[EUR][1000 genomes]
rs9872724	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460763	chr3:94384332-94596072	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv590988	chr3:94384332-94596072	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv877167	chr3:94430430-94554720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv877168	chr3:94430430-94614333	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv460764	chr3:94479849-94654181	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv590989	chr3:94479849-94654181	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:94539600-94539800	Enhancers	Fetal Brain Female	brain
2	chr3:94539600-94540600	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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