Variant report
| Variant | rs73181912 |
|---|---|
| Chromosome Location | chr7:103483156-103483157 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
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| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:35)
| rs_ID | r2[population] |
|---|---|
| rs10215861 | 0.82[ASN][1000 genomes] |
| rs10233074 | 0.99[ASN][1000 genomes] |
| rs10250074 | 0.84[ASN][1000 genomes] |
| rs10262803 | 0.99[ASN][1000 genomes] |
| rs10266261 | 0.99[ASN][1000 genomes] |
| rs10267445 | 0.82[ASN][1000 genomes] |
| rs10272530 | 0.97[ASN][1000 genomes] |
| rs10275624 | 0.95[ASN][1000 genomes] |
| rs10276941 | 0.82[ASN][1000 genomes] |
| rs10279423 | 0.99[ASN][1000 genomes] |
| rs12534629 | 0.99[ASN][1000 genomes] |
| rs12536007 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs1510855 | 0.99[ASN][1000 genomes] |
| rs1510857 | 0.99[ASN][1000 genomes] |
| rs17157063 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs1848959 | 0.82[ASN][1000 genomes] |
| rs2299395 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs28374422 | 0.97[ASN][1000 genomes] |
| rs28417410 | 0.99[ASN][1000 genomes] |
| rs28418870 | 0.99[ASN][1000 genomes] |
| rs28513620 | 0.82[ASN][1000 genomes] |
| rs28529490 | 0.99[ASN][1000 genomes] |
| rs28628152 | 0.99[ASN][1000 genomes] |
| rs28658324 | 0.99[ASN][1000 genomes] |
| rs28710358 | 0.98[ASN][1000 genomes] |
| rs28803202 | 0.99[ASN][1000 genomes] |
| rs28841308 | 0.98[ASN][1000 genomes] |
| rs28880083 | 0.98[ASN][1000 genomes] |
| rs4727575 | 0.82[ASN][1000 genomes] |
| rs56673287 | 0.99[ASN][1000 genomes] |
| rs56739105 | 0.99[ASN][1000 genomes] |
| rs57559907 | 0.99[ASN][1000 genomes] |
| rs60861793 | 0.99[ASN][1000 genomes] |
| rs6951263 | 0.99[ASN][1000 genomes] |
| rs73181915 | 0.99[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv1843940 | chr7:103421702-103590285 | Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:103473200-103495200 | Weak transcription | HepG2 | liver |
| 2 | chr7:103483000-103483800 | Enhancers | K562 | blood |
