Variant report

Variant	rs73214951
Chromosome Location	chr4:30949486-30949487
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11729676	1.00[AFR][1000 genomes]
rs73213200	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878810	chr4:30823157-30987395	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30928600-30997400	Weak transcription	Fetal Lung	lung
2	chr4:30941600-30951800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:30945000-30952400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr4:30945200-30954000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr4:30945400-30950200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:30945400-30954600	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:30947400-30952200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr4:30947600-30952600	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr4:30947800-30949800	Weak transcription	NH-A	brain
10	chr4:30947800-30950400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr4:30947800-30950400	Weak transcription	NHEK	skin
12	chr4:30947800-30951600	Weak transcription	Fetal Intestine Large	intestine
13	chr4:30947800-30952000	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr4:30948000-30950000	Weak transcription	HUVEC	blood vessel
15	chr4:30948000-30950400	Weak transcription	HMEC	breast
16	chr4:30948200-30950400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr4:30948200-30950400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr4:30948200-30950400	Weak transcription	Fetal Stomach	stomach
19	chr4:30948200-30951600	Weak transcription	Fetal Intestine Small	intestine
20	chr4:30948200-30951800	Weak transcription	Left Ventricle	heart
21	chr4:30948200-30953000	Weak transcription	Aorta	Aorta
22	chr4:30948200-30954200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr4:30948200-30956000	Weak transcription	Fetal Heart	heart
24	chr4:30949400-30955800	Enhancers	Hela-S3	cervix

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