The 2.0 version of rSNPBase

Variant report

Variant rs73224606
Chromosome Location chr2:20997378-20997379
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20954200-21001200 Weak transcription NH-A brain
2 chr2:20965800-21003400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:20968400-21003000 Weak transcription Pancreas Pancrea
4 chr2:20969000-21003000 Weak transcription Gastric stomach
5 chr2:20973200-21003000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:20974600-21021800 Weak transcription Thymus Thymus
7 chr2:20974800-21000200 Weak transcription HSMM muscle
8 chr2:20980800-20997800 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:20983400-20999000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:20987200-20997800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:20989200-20999200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:20989200-21006000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr2:20989600-20999200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr2:20989600-21003200 Weak transcription Left Ventricle heart
15 chr2:20989600-21009000 Weak transcription Fetal Lung lung
16 chr2:20989600-21010400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:20989800-21000400 Weak transcription Fetal Stomach stomach
18 chr2:20989800-21003200 Weak transcription Aorta Aorta
19 chr2:20989800-21003800 Weak transcription Duodenum Mucosa Duodenum
20 chr2:20990000-20999200 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr2:20990000-21002400 Weak transcription Fetal Thymus thymus
22 chr2:20990200-20998400 Weak transcription Dnd41 blood
23 chr2:20990200-21002800 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr2:20990200-21003000 Weak transcription Lung lung
25 chr2:20990200-21006200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr2:20990400-20998200 Weak transcription Stomach Smooth Muscle stomach
27 chr2:20990400-21001600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr2:20991200-20998400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr2:20994000-21000000 Weak transcription Fetal Kidney kidney
30 chr2:20994000-21002600 Weak transcription Fetal Intestine Large intestine
31 chr2:20994200-21003000 Weak transcription Fetal Muscle Trunk muscle
32 chr2:20994600-20998200 Strong transcription Primary hematopoietic stem cells blood
33 chr2:20994600-20998800 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:20994600-21000800 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr2:20994800-20997600 Weak transcription Primary T cells from cord blood blood
36 chr2:20994800-20997800 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr2:20994800-20999600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr2:20994800-21021600 Weak transcription Primary B cells from peripheral blood blood
39 chr2:20994800-21021600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr2:20994800-21021800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:20995000-20997400 Enhancers Hela-S3 cervix
42 chr2:20995000-21002600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr2:20995000-21002800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr2:20995000-21017600 Weak transcription A549 lung
45 chr2:20995200-20998000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:20995200-21003000 Weak transcription Ovary ovary
47 chr2:20995200-21021600 Weak transcription K562 blood
48 chr2:20995400-20998400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr2:20995800-20997400 Enhancers Liver Liver
50 chr2:20995800-20998800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015