The 2.0 version of rSNPBase

Variant report

Variant rs73243138
Chromosome Location chr2:20972406-20972407
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20926200-20977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:20926400-20995000 Weak transcription Hela-S3 cervix
3 chr2:20937200-20974400 Weak transcription HSMM muscle
4 chr2:20949200-20979200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr2:20951600-20973600 Weak transcription Brain Cingulate Gyrus brain
6 chr2:20951800-20993200 Weak transcription Colon Smooth Muscle Colon
7 chr2:20952800-20974000 Weak transcription A549 lung
8 chr2:20952800-20990400 Weak transcription Rectal Smooth Muscle rectum
9 chr2:20953000-20989400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:20954200-21001200 Weak transcription NH-A brain
11 chr2:20957800-20973600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr2:20957800-20988400 Weak transcription Left Ventricle heart
13 chr2:20957800-20988800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr2:20958400-20977600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr2:20958600-20995800 Weak transcription HMEC breast
16 chr2:20959000-20995400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr2:20959200-20973600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr2:20959200-20997000 Weak transcription Brain Substantia Nigra brain
19 chr2:20959800-20972800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr2:20960400-20977200 Weak transcription Stomach Mucosa stomach
21 chr2:20960600-20983600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:20960600-20989200 Weak transcription Brain Hippocampus Middle brain
23 chr2:20960800-20973000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:20960800-20978200 Weak transcription NHEK skin
25 chr2:20960800-20989000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:20960800-20996200 Weak transcription HSMMtube muscle
27 chr2:20961200-20973600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:20961400-20972800 Weak transcription K562 blood
29 chr2:20963400-20974000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr2:20963400-20976600 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:20964000-20981600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:20964000-20996000 Weak transcription Osteobl bone
33 chr2:20965600-20982400 Weak transcription NHLF lung
34 chr2:20965800-20993200 Weak transcription Fetal Brain Female brain
35 chr2:20965800-21003400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr2:20967000-20980000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr2:20967800-20986400 Weak transcription Placenta Placenta
38 chr2:20968000-20988800 Weak transcription Brain Germinal Matrix brain
39 chr2:20968200-20988800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:20968400-20973400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr2:20968400-20983400 Weak transcription Fetal Intestine Small intestine
42 chr2:20968400-20988600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr2:20968400-20988800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:20968400-20988800 Weak transcription Ovary ovary
45 chr2:20968400-20989000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:20968400-20993800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:20968400-21003000 Weak transcription Pancreas Pancrea
48 chr2:20968600-20993600 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr2:20968600-20996200 Weak transcription Muscle Satellite Cultured Cells --
50 chr2:20968800-20992600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015