Variant report

Variant	rs73232723
Chromosome Location	chr3:142540313-142540314
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs73157664	1.00[AMR][1000 genomes]
rs73232752	1.00[AMR][1000 genomes]
rs73232754	1.00[AMR][1000 genomes]
rs73234752	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1000631	chr3:142516367-142572058	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142499400-142547800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:142514800-142572000	Weak transcription	Right Ventricle	heart
3	chr3:142519000-142572000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr3:142522200-142551800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr3:142524800-142561000	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr3:142525000-142543800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr3:142525000-142555800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:142527600-142547400	Weak transcription	A549	lung
9	chr3:142528400-142569400	Weak transcription	Left Ventricle	heart
10	chr3:142531000-142541600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr3:142531000-142541600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr3:142534400-142547400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr3:142535800-142559200	Weak transcription	Aorta	Aorta
14	chr3:142536400-142540400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr3:142538000-142547600	Weak transcription	Liver	Liver
16	chr3:142539200-142541600	Strong transcription	Adipose Nuclei	Adipose
17	chr3:142539800-142542200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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